RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 CLSTN1O94985 981 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 STAU1O95793 577 aaKnown RBP29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 SLC9A1P19634 815 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 CTNNB1P35222 781 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 BRCC3P46736 316 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 IGSF21Q96ID5 467 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 XPO4Q9C0E2 1151 aaKnown RBP29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 SPG21Q9NZD8 308 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 RWDD3Q9Y3V2 267 aa29.82■■■□□ 2.36
CHCHD4-201ENST00000295767 CARNS1A5YM72 827 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 KPNA7A9QM74 516 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 TADA2AO75478 443 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 DNAJB2P25686 324 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 PON1P27169 355 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 BMPR1AP36894 532 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 AARSP49588 968 aaKnown RBP eCLIP29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 NOP14P78316 857 aaKnown RBP29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 PTPN21Q16825 1174 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 TRIM65Q6PJ69 517 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 TAF4BQ92750 862 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 VRTNQ9H8Y1 702 aa29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 APOBEC3GQ9HC16 384 aaKnown RBP29.81■■■□□ 2.36
CHCHD4-201ENST00000295767 I3L4J1 428 aa29.8■■■□□ 2.36
CHCHD4-201ENST00000295767 WDR72Q3MJ13 1102 aa29.8■■■□□ 2.36
CHCHD4-201ENST00000295767 LRIT3Q3SXY7 679 aa29.8■■■□□ 2.36
CHCHD4-201ENST00000295767 TIGD5Q53EQ6 642 aa29.8■■■□□ 2.36
CHCHD4-201ENST00000295767 CCDC150Q8NCX0 1101 aa29.8■■■□□ 2.36
CHCHD4-201ENST00000295767 FSD2A1L4K1 749 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 PPM1AP35813 382 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 LRMPQ12912 555 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 SYCP1Q15431 976 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 ZNF667Q5HYK9 610 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 WDR44Q5JSH3 913 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 ERGIC2Q96RQ1 377 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 TGS1Q96RS0 853 aaKnown RBP29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 MTUS1Q9ULD2 1270 aa29.79■■■□□ 2.36
CHCHD4-201ENST00000295767 TRIOBPQ9H2D6 2365 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 GOLGA6L3A6NEY3 463 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 KLK7P49862 253 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 APBA1Q02410 837 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 PPP2R2DQ66LE6 453 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 FUT10Q6P4F1 479 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 TATDN2Q93075 761 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 TMEM169Q96HH4 297 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 GPR62Q9BZJ7 368 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 NXF1Q9UBU9 619 aaKnown RBP29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 POLIQ9UNA4 740 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SIK3Q9Y2K2 1263 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SNX9Q9Y5X1 595 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 CBFA2T2O43439 604 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 KLHL23Q8NBE8 558 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SUSD3Q96L08 255 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SENP8Q96LD8 212 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 VN1R3Q9BXE9 311 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SLC28A3Q9HAS3 691 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 SIX2Q9NPC8 291 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 GDAP2Q9NXN4 497 aa29.78■■■□□ 2.36
CHCHD4-201ENST00000295767 CHD9Q3L8U1 2897 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 SF3B1O75533 1304 aaKnown RBP eCLIP29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 FGF18O76093 207 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 PAX3P23760 479 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 ERVK-21P61565 698 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 DPY19L2P1Q6NXN4 242 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 DSTYKQ6XUX3 929 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 TIFAQ96CG3 184 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 SAMD11Q96NU1 681 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 NT5C1BQ96P26 610 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 LSM14BQ9BX40 385 aaKnown RBP29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 TRIM5Q9C035 493 aa29.77■■■□□ 2.36
CHCHD4-201ENST00000295767 C5orf67F2Z3F1 127 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 M0QZQ0 153 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 EFEMP2O95967 443 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 TNNC1P63316 161 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 ARHGEF19Q8IW93 802 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 PLVAPQ9BX97 442 aa29.76■■■□□ 2.35
CHCHD4-201ENST00000295767 TRAPPC3O43617 180 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 TPM3P06753 285 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 PHLDB3Q6NSJ2 640 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 SCARA5Q6ZMJ2 495 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 NIF3L1Q9GZT8 377 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 GRPEL1Q9HAV7 217 aa29.75■■■□□ 2.35
CHCHD4-201ENST00000295767 A0A1W2PQC6 194 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 CYB561D2O14569 222 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 PBX1P40424 430 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 ASPAP45381 313 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 PLCB3Q01970 1234 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 RNF168Q8IYW5 571 aaPredicted RBP29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 PCMTD1Q96MG8 357 aaPredicted RBP29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 MMS19Q96T76 1030 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 CERS4Q9HA82 394 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 COL4A4P53420 1690 aaPredicted RBP29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 CHD7Q9P2D1 2997 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 ELAVL2Q12926 359 aaKnown RBP29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 FAM171A1Q5VUB5 890 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 GJB7Q6PEY0 223 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 PPM1KQ8N3J5 372 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 SMYD3Q9H7B4 428 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 APEX2Q9UBZ4 518 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 L1RE1Q9UN81 338 aa29.74■■■□□ 2.35
CHCHD4-201ENST00000295767 HUS1O60921 280 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms