RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 TAF11Q15544 211 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 PCNX4Q63HM2 1172 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 EMC1Q8N766 993 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 HELQQ8TDG4 1101 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 SERPINB12Q96P63 405 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 FAM47DPA6NHR8 397 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 RASSF9O75901 435 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 RCN2Q14257 317 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 ZBTB41Q5SVQ8 909 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 MFSD7Q6UXD7 560 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 BBOF1Q8ND07 529 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 MCPH1Q8NEM0 835 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 AGAP11Q8TF27 550 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 WRNIP1Q96S55 665 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 NOP53Q9NZM5 478 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 SLC9A2Q9UBY0 812 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 CNOT7Q9UIV1 285 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 RIPK3Q9Y572 518 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 UPP2O95045 317 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 GTF2BQ00403 316 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 FASTKD3Q14CZ7 662 aaKnown RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 MDH1BQ5I0G3 518 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 CENPUQ71F23 418 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 SLC9A9Q8IVB4 645 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 KCTD6Q8NC69 237 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 CFAP36Q96G28 342 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 ROPN1BQ9BZX4 212 aaPredicted RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 ROPN1Q9HAT0 212 aaPredicted RBP16.32■□□□□ 0.2
CAPN2-201ENST00000295006 UBN1Q9NPG3 1134 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 MAD1L1Q9Y6D9 718 aa16.32■□□□□ 0.2
CAPN2-201ENST00000295006 DDX60LQ5H9U9 1706 aaKnown RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 ASAP2O43150 1006 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 KITP10721 976 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 SSTR1P30872 391 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 GCKP35557 465 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 MSH2P43246 934 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 EAPPQ56P03 285 aaPredicted RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 KRT4P19013 534 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 SFNP31947 248 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 CASC4Q6P4E1 433 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 NCAPG2Q86XI2 1143 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 WHRNQ9P202 907 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 PECAM1P16284 738 aaPredicted RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 DRG2P55039 364 aaKnown RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 RMDN2Q96LZ7 410 aa16.31■□□□□ 0.2
CAPN2-201ENST00000295006 ZNF317Q96PQ6 595 aaPredicted RBP16.31■□□□□ 0.2
CAPN2-201ENST00000295006 UMODL1Q5DID0 1318 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 DGAT1O75907 488 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 PROSCO94903 275 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CYP1A2P05177 515 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 KRT16P08779 473 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 TCF4P15884 667 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 ACTR2P61160 394 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 FAXCQ5TGI0 409 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 GPAT2Q6NUI2 795 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 MIS18BP1Q6P0N0 1132 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 GLIS1Q8NBF1 620 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 NSUN6Q8TEA1 469 aaKnown RBP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 P3H4Q92791 437 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 FAM81BQ96LP2 452 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 EPB41L4BQ9H329 900 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 PHTF1Q9UMS5 762 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CHMP2BQ9UQN3 213 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CCDC195A0A1B0GUA6 201 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CST8O60676 142 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CBX6O95503 412 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CUL2Q13617 745 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 TTLL12Q14166 644 aaPredicted RBP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 C1orf220Q5T0J3 134 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 CCDC60Q8IWA6 550 aaPredicted RBP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 FEZF2Q8TBJ5 459 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 SENP7Q9BQF6 1050 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 MTMR12Q9C0I1 747 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 PARVAQ9NVD7 372 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 MAPK13O15264 365 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
CAPN2-201ENST00000295006 DSG3P32926 999 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 ITIH4Q14624 930 aa16.3■□□□□ 0.2
CAPN2-201ENST00000295006 STAT4Q14765 748 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms