RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CYP39A1Q9NYL5 469 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 TBX20Q9UMR3 447 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 CHRM1P11229 460 aaPredicted RBP15.56■□□□□ 0.08
CCNF-201ENST00000293968 CCNB1P14635 433 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 TNRC6CQ9HCJ0 1690 aaKnown RBP15.56■□□□□ 0.08
CCNF-201ENST00000293968 PIK3CDO00329 1044 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 VIL1P09327 827 aaKnown RBP15.56■□□□□ 0.08
CCNF-201ENST00000293968 ADRA1DP25100 572 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 SLC1A1P43005 524 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 PTDSS1P48651 473 aaKnown RBP15.56■□□□□ 0.08
CCNF-201ENST00000293968 CENPCQ03188 943 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 BIRC2Q13490 618 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 MTMR1Q13613 665 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 BLMHQ13867 455 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 CCNG2Q16589 344 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 ZNF394Q53GI3 561 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 FAM182AQ5T1J6 154 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 DDX27Q96GQ7 796 aaKnown RBP15.56■□□□□ 0.08
CCNF-201ENST00000293968 TSC22D3Q99576 134 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCNF-201ENST00000293968 PROSCO94903 275 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 KCTD17Q8N5Z5 321 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 C7orf43Q8WVR3 580 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 LRMDAQ9H2I8 198 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 STARD13Q9Y3M8 1113 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 IKBKGQ9Y6K9 419 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 DPPA5A6NC42 116 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 PEX11AO75192 247 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 CFHP08603 1231 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 ADSSP30520 456 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 MYBPC2Q14324 1141 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 EFTUD2Q15029 972 aaKnown RBP eCLIP15.55■□□□□ 0.082e-7■■■■■ 40.7
CCNF-201ENST00000293968 UGCGQ16739 394 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 BBS9Q3SYG4 887 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 ZC3H18Q86VM9 953 aaKnown RBP15.55■□□□□ 0.08
CCNF-201ENST00000293968 TMEM121Q9BTD3 319 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 DLGAP2Q9P1A6 1054 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 GYG2O15488 501 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 ASMTLO95671 621 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 ATP4AP20648 1035 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 CPA2P48052 419 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 ACOT2P49753 483 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 NFX1Q12986 1120 aaKnown RBP15.55■□□□□ 0.08
CCNF-201ENST00000293968 CENPUQ71F23 418 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 PALM2Q8IXS6 379 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 PYROXD1Q8WU10 500 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 TTC17Q96AE7 1141 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 CEP170P1Q96L14 293 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 DENND2DQ9H6A0 471 aaPredicted RBP15.55■□□□□ 0.08
CCNF-201ENST00000293968 LGALS13Q9UHV8 139 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 CORO1CQ9ULV4 474 aaPredicted RBP15.55■□□□□ 0.08
CCNF-201ENST00000293968 SRCAPQ6ZRS2 3230 aa15.55■□□□□ 0.08
CCNF-201ENST00000293968 NPTX2P47972 431 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 OTOAQ7RTW8 1153 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 SAE1Q9UBE0 346 aaPredicted RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 MARK3P27448 753 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 SSTR1P30872 391 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 RCN1Q15293 331 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 TATDN1Q6P1N9 297 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 RFWD3Q6PCD5 774 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 RIT2Q99578 217 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 GINM1Q9NU53 330 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 NFIBO00712 420 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 GM2AP17900 193 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 ADRA2BP18089 450 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 GNA15P30679 374 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 NR1H3Q13133 447 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 MDH1BQ5I0G3 518 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 TMEM63BQ5T3F8 832 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 AP1ARQ63HQ0 302 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 ZCCHC9Q8N567 271 aaKnown RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 ZNF75CPQ92670 426 aaPredicted RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 TRIM11Q96F44 468 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 GRID1Q9ULK0 1009 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 SCAF8Q9UPN6 1271 aaKnown RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 EDF1O60869 148 aaKnown RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 ZBED4O75132 1171 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 HAUS5O94927 633 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 TPBGLP0DKB5 382 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 FDX1P10109 184 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 TCF4P15884 667 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 RCN2Q14257 317 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 CEP128Q6ZU80 1094 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 MAML1Q92585 1016 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 FAM81BQ96LP2 452 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 MRPL47Q9HD33 250 aaKnown RBP15.54■□□□□ 0.08
CCNF-201ENST00000293968 ANKFY1Q9P2R3 1169 aa15.54■□□□□ 0.08
CCNF-201ENST00000293968 NVLO15381 856 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 SKIV2L2P42285 1042 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 LIG4P49917 911 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 POLE2P56282 527 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 LMNB2Q03252 620 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 MFSD7Q6UXD7 560 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 SLCO2A1Q92959 643 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 MAK16Q9BXY0 300 aaKnown RBP15.53■□□□□ 0.08
CCNF-201ENST00000293968 HEY2Q9UBP5 337 aa15.53■□□□□ 0.08
CCNF-201ENST00000293968 PCDHB2Q9Y5E7 798 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms