RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 RHBDF2Q6PJF5 856 aa16.03■□□□□ 0.16
CCDC116-201ENST00000292779 TRMT10CQ7L0Y3 403 aaKnown RBP16.03■□□□□ 0.16
CCDC116-201ENST00000292779 RBBP8NLQ8NC74 664 aaPredicted RBP16.03■□□□□ 0.16
CCDC116-201ENST00000292779 KCNN1Q92952 543 aa16.03■□□□□ 0.16
CCDC116-201ENST00000292779 SNF8Q96H20 258 aa16.03■□□□□ 0.16
CCDC116-201ENST00000292779 CGRRF1Q99675 332 aa16.03■□□□□ 0.16
CCDC116-201ENST00000292779 LDHAP00338 332 aaKnown RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 RALAP11233 206 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 UBA1P22314 1058 aaKnown RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 ALDH5A1P51649 535 aaPredicted RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 TAS2R40P59535 323 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 NOP14P78316 857 aaKnown RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 PTP4A2Q12974 167 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 MAMLD1Q13495 774 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 TNFAIP8L3Q5GJ75 292 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 SH3D19Q5HYK7 790 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 FBXW10Q5XX13 1052 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 TRIM72Q6ZMU5 477 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 MMS22LQ6ZRQ5 1243 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 ATXN2LQ8WWM7 1075 aaKnown RBP16.02■□□□□ 0.16
CCDC116-201ENST00000292779 CHMP6Q96FZ7 201 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 CABS1Q96KC9 395 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 CCDC114Q96M63 670 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 ADGRA2Q96PE1 1338 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 CNTNAP2Q9UHC6 1331 aa16.02■□□□□ 0.16
CCDC116-201ENST00000292779 THAP12O43422 761 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 ACSL3O95573 720 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 MAN1A1P33908 653 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 IREB2P48200 963 aaKnown RBP16.02■□□□□ 0.15
CCDC116-201ENST00000292779 KLF1Q13351 362 aaPredicted RBP16.02■□□□□ 0.15
CCDC116-201ENST00000292779 LBX2Q6XYB7 198 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 SYDE1Q6ZW31 735 aaPredicted RBP16.02■□□□□ 0.15
CCDC116-201ENST00000292779 ARMC9Q7Z3E5 817 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 CACNA2D3Q8IZS8 1091 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 GRK7Q8WTQ7 553 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 PCYT2Q99447 389 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 FAM118BQ9BPY3 351 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.15
CCDC116-201ENST00000292779 MAF1Q9H063 256 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 CSADQ9Y600 493 aa16.02■□□□□ 0.15
CCDC116-201ENST00000292779 IGKV6D-21A0A0A0MT36 114 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 PSTPIP1O43586 416 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 FARP2O94887 1054 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GJB6O95452 261 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GAS8O95995 478 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 TBXAS1P24557 533 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 ITGA8P53708 1063 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 LONRF1Q17RB8 773 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GKAP1Q5VSY0 366 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 PHF13Q86YI8 300 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 RHOT1Q8IXI2 618 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 ATL2Q8NHH9 583 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 ZNF317Q96PQ6 595 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 MRPL47Q9HD33 250 aaKnown RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 USTQ9Y2C2 406 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GSTTP1A0A1W2PQM5 241 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 GJC1P36383 396 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 VPS41P49754 854 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 MOGSQ13724 837 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 NCOA4Q13772 614 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 CAPSQ13938 189 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 CCDC38Q502W7 563 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 LDLRAD1Q5T700 205 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 PLEKHA7Q6IQ23 1121 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 MFSD5Q6N075 450 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 CCDC121Q6ZUS5 278 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 VCPIP1Q96JH7 1222 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 ROPN1BQ9BZX4 212 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 STMN4Q9H169 189 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 R3HDMLQ9H3Y0 253 aa16.01■□□□□ 0.15
CCDC116-201ENST00000292779 ROPN1Q9HAT0 212 aaPredicted RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 DNAJC17Q9NVM6 304 aaKnown RBP16.01■□□□□ 0.15
CCDC116-201ENST00000292779 TTLL13PA6NNM8 815 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 TLR3O15455 904 aaKnown RBP16■□□□□ 0.15
CCDC116-201ENST00000292779 ATF2P15336 505 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 CD58P19256 250 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 ADCY8P40145 1251 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 SSR1P43307 286 aaKnown RBP16■□□□□ 0.15
CCDC116-201ENST00000292779 DRP2Q13474 957 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 ANKS1BQ7Z6G8 1248 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 KATNAL2Q8IYT4 538 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 ANKRD13AQ8IZ07 590 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
CCDC116-201ENST00000292779 INTS9Q9NV88 658 aaKnown RBP16■□□□□ 0.15
CCDC116-201ENST00000292779 H0YHG0 523 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 NF2P35240 595 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 RFC5P40937 340 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 TNFSF9P41273 254 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 ACTN3Q08043 901 aaPredicted RBP15.99■□□□□ 0.15
CCDC116-201ENST00000292779 TARBP2Q15633 366 aaKnown RBP15.99■□□□□ 0.15
CCDC116-201ENST00000292779 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 CNPY4Q8N129 248 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 OPTNQ96CV9 577 aa15.99■□□□□ 0.15
CCDC116-201ENST00000292779 SCLT1Q96NL6 688 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms