RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 NDRG2Q9UN36 371 aaKnown RBP9.62□□□□□ -0.87
TFF1-201ENST00000291527 ZFP37Q9Y6Q3 630 aaPredicted RBP9.62□□□□□ -0.87
TFF1-201ENST00000291527 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
TFF1-201ENST00000291527 ECI2O75521 394 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 TOM1L1O75674 476 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 MYL4P12829 197 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 TDGF1P13385 188 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 MCM4P33991 863 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 NCKAP1LP55160 1127 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 DUSP4Q13115 394 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 MTAPQ13126 283 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 KARSQ15046 597 aaKnown RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 ZC2HC1CQ53FD0 456 aaPredicted RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 PDXDC1Q6P996 788 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 MTSS1LQ765P7 747 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 MAP4K3Q8IVH8 894 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 ATAD1Q8NBU5 361 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 SPIRE2Q8WWL2 714 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 CLDN23Q96B33 292 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 ELSPBP1Q96BH3 223 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 KIF12Q96FN5 646 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 AVENQ9NQS1 362 aaPredicted RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 RBM12Q9NTZ6 932 aaKnown RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 POLR3BQ9NW08 1133 aaPredicted RBP9.61□□□□□ -0.87
TFF1-201ENST00000291527 PCDHB8Q9UN66 801 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 NUB1Q9Y5A7 615 aa9.61□□□□□ -0.87
TFF1-201ENST00000291527 ANAPC1Q9H1A4 1944 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 M0QZQ0 153 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 ARNTLO00327 626 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 SYN3O14994 580 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 TRAPPC3O43617 180 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 LRG1P02750 347 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 NFICP08651 508 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 TGM1P22735 817 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 LRPAP1P30533 357 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 GDI1P31150 447 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 ELF1P32519 619 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 RPL9P32969 192 aaKnown RBP9.6□□□□□ -0.87
TFF1-201ENST00000291527 AARSP49588 968 aaKnown RBP eCLIP9.6□□□□□ -0.87
TFF1-201ENST00000291527 PRKCQQ04759 706 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 KCNA1Q09470 495 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 SRSF5Q13243 272 aaKnown RBP9.6□□□□□ -0.87
TFF1-201ENST00000291527 LPAL2Q16609 132 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 CCDC142Q17RM4 750 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 JADE1Q6IE81 842 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 FAM173BQ6P4H8 233 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 TXNDC11Q6PKC3 985 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 GAREM2Q75VX8 874 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 HAUS6Q7Z4H7 955 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 LRRTM3Q86VH5 581 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 GPBP1Q86WP2 473 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 BEST2Q8NFU1 509 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 OR10T2Q8NGX3 314 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 NELL1Q92832 810 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 FAM212AQ96EL1 285 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 ZFYVE19Q96K21 471 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 LPIN3Q9BQK8 851 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 FGFBP2Q9BYJ0 223 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 SMG9Q9H0W8 520 aaKnown RBP9.6□□□□□ -0.87
TFF1-201ENST00000291527 PARD6AQ9NPB6 346 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 TOPORSQ9NS56 1045 aaPredicted RBP9.6□□□□□ -0.87
TFF1-201ENST00000291527 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 AFF4Q9UHB7 1163 aaKnown RBP9.6□□□□□ -0.87
TFF1-201ENST00000291527 YIPF1Q9Y548 306 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 GREB1Q4ZG55 1949 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 CHD8Q9HCK8 2581 aa9.6□□□□□ -0.87
TFF1-201ENST00000291527 MYO16Q9Y6X6 1858 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
TFF1-201ENST00000291527 FRYQ5TBA9 3013 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 SPAG17Q6Q759 2223 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 MYOFQ9NZM1 2061 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 A0A1W2PRU2 124 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 HEPACAM2A8MVW5 462 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 CLDN3O15551 220 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 LAMTOR5O43504 91 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 OAZ2O95190 189 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 ADRB2P07550 413 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 CPB1P15086 417 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 PLCG1P19174 1290 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 MATR3P43243 847 aaKnown RBP eCLIP9.59□□□□□ -0.87
TFF1-201ENST00000291527 ACOT2P49753 483 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 EPHA5P54756 1037 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 SATB1Q01826 763 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 CRELD2Q6UXH1 353 aaPredicted RBP9.59□□□□□ -0.87
TFF1-201ENST00000291527 ZPBP2Q6X784 338 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 PDZD4Q76G19 769 aaPredicted RBP9.59□□□□□ -0.87
TFF1-201ENST00000291527 RIN3Q8TB24 985 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 ZSCAN18Q8TBC5 510 aaPredicted RBP9.59□□□□□ -0.87
TFF1-201ENST00000291527 SHDQ96IW2 340 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 EPSTI1Q96J88 318 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 BCO2Q9BYV7 579 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 LMAN1LQ9HAT1 526 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 ZFP14Q9HCL3 533 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 SLC38A7Q9NVC3 462 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 TMLHEQ9NVH6 421 aa9.59□□□□□ -0.87
TFF1-201ENST00000291527 TBX20Q9UMR3 447 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms