RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 NFICP08651 508 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 IL9P15248 144 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 EPCAMP16422 314 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 HOXB8P17481 243 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 BRCC3P46736 316 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 GLUD2P49448 558 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 GUCY2FP51841 1108 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 YARSP54577 528 aaKnown RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 CLDN10P78369 228 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 KNOP1Q1ED39 458 aaKnown RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 AAK1Q2M2I8 961 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 FAM171A1Q5VUB5 890 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 JADE1Q6IE81 842 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 KANK3Q6NY19 840 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 SLC9A9Q8IVB4 645 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 BRSK2Q8IWQ3 736 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 CEP57L1Q8IYX8 460 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 WNT2BQ93097 391 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 RPF1Q9H9Y2 349 aaKnown RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 SLC39A2Q9NP94 309 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 ENTPD7Q9NQZ7 604 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 MRPL17Q9NRX2 175 aaKnown RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 CHMP5Q9NZZ3 219 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 BARX2Q9UMQ3 279 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 UBQLN1Q9UMX0 589 aaKnown RBP9.95□□□□□ -0.82
HMGN1-201ENST00000288344 EXOC7Q9UPT5 735 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 BACE2Q9Y5Z0 518 aa9.95□□□□□ -0.82
HMGN1-201ENST00000288344 SF3B1O75533 1304 aaKnown RBP eCLIP9.94□□□□□ -0.824e-6■□□□□ 8.6
HMGN1-201ENST00000288344 UBE4BO95155 1302 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PTPRJQ12913 1337 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 FSD2A1L4K1 749 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 KIAA0391O15091 583 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 NR1I2O75469 434 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 ABLIM3O94929 683 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 OAZ2O95190 189 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 LDHAP00338 332 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 RPN1P04843 607 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 BMP6P22004 513 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 LILRA4P59901 499 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 FAM160A1Q05DH4 1040 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 SMAD4Q13485 552 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 RAB33AQ14088 237 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 NFIL3Q16649 462 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 ZCWPW2Q504Y3 356 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 COBLL1Q53SF7 1204 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 C9orf57Q5W0N0 161 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PTCRAQ6ISU1 281 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 SLC8B1Q6J4K2 584 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PRSS55Q6UWB4 352 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 NT5DC4Q86YG4 428 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 CBWD2Q8IUF1 395 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 CMASQ8NFW8 434 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 HASPINQ8TF76 798 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 HDAC7Q8WUI4 952 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 POMGNT1Q8WZA1 660 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 SAAL1Q96ER3 474 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 BICD1Q96G01 975 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 MFSD14AQ96MC6 490 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 NECAB3Q96P71 396 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 FAM213AQ9BRX8 229 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 TTPALQ9BTX7 342 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 ADAM7Q9H2U9 754 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 MTRRQ9UBK8 725 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 SIX4Q9UIU6 781 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 CD207Q9UJ71 328 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 CDH22Q9UJ99 828 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 PCDHGC3Q9UN70 934 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 TRAF3IP3Q9Y228 551 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 SSX2IPQ9Y2D8 614 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.94□□□□□ -0.82
HMGN1-201ENST00000288344 MYO10Q9HD67 2058 aa9.94□□□□□ -0.82
HMGN1-201ENST00000288344 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 GOLGA8IPA6NC78 632 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 GOLGA8JA6NMD2 632 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 LOC730098B7Z3J9 87 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 I3L4J1 428 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 SYN3O14994 580 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 TGM5O43548 720 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 CSPG5O95196 566 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 VNN2O95498 520 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 CYP11A1P05108 521 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 RPL17P18621 184 aaKnown RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 TKTP29401 623 aaKnown RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 ZP2Q05996 745 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 ELAVL2Q12926 359 aaKnown RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 MYBPC2Q14324 1141 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 CBX2Q14781 532 aaPredicted RBP9.93□□□□□ -0.82
HMGN1-201ENST00000288344 C1orf220Q5T0J3 134 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 PPFIBP1Q86W92 1011 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 GPD1LQ8N335 351 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 ANKK1Q8NFD2 765 aa9.93□□□□□ -0.82
HMGN1-201ENST00000288344 BEST2Q8NFU1 509 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms