RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ARFIP2P53365 341 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 BNIP1Q12981 228 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 LRRC36Q1X8D7 754 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 CFAP157Q5JU67 520 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 SPDYCQ5MJ68 293 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 ZDHHC14Q8IZN3 488 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 AGBL1Q96MI9 1066 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 EPB41L4BQ9H329 900 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 ZFATQ9P243 1243 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 STOML1Q9UBI4 398 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 PCSK1NQ9UHG2 260 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 ROBO1Q9Y6N7 1651 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 GAKO14976 1311 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 SKIP12755 728 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 RPA3P35244 121 aaPredicted RBP14.16□□□□□ -0.14
SCAF4-201ENST00000286835 RCN1Q15293 331 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 BMT2Q1RMZ1 405 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 MTERF2Q49AM1 385 aa14.16□□□□□ -0.14
SCAF4-201ENST00000286835 PPARGC1AQ9UBK2 798 aaKnown RBP14.16□□□□□ -0.14
SCAF4-201ENST00000286835 ZNF70Q9UC06 446 aaPredicted RBP14.16□□□□□ -0.14
SCAF4-201ENST00000286835 KLC1Q07866 573 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 MPP2Q14168 576 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 ZNF268Q14587 947 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SEZ6Q53EL9 994 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 BSPRYQ5W0U4 402 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 KREMEN1Q96MU8 473 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 PPP1R12AO14974 1030 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 ADRB2P07550 413 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 GMPSP49915 693 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 IRX1P78414 480 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 MTFR1Q15390 333 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SV2AQ7L0J3 742 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SEMA4DQ92854 862 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 TMEM121Q9BTD3 319 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 TBC1D10AQ9BXI6 508 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 RAVER2Q9HCJ3 691 aaKnown RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 GLI3P10071 1580 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 OPHN1O60890 802 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 TJP3O95049 919 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 PSMC4P43686 418 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 BPIFB4P59827 614 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SATB1Q01826 763 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 KDSRQ06136 332 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 LENG9Q96B70 501 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 CFAP36Q96G28 342 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 ZNF570Q96NI8 536 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SLC13A1Q9BZW2 595 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 WRAP73Q9P2S5 460 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 HEY2Q9UBP5 337 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 NVLO15381 856 aaKnown RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 HOXA10P31260 410 aaPredicted RBP14.15□□□□□ -0.14
SCAF4-201ENST00000286835 TRPC3Q13507 836 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 MAGEC3Q8TD91 643 aa14.15□□□□□ -0.14
SCAF4-201ENST00000286835 SRCAPQ6ZRS2 3230 aa14.15□□□□□ -0.15
SCAF4-201ENST00000286835 UBTFL6P0CB48 400 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 MARK3P27448 753 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 FOXN2P32314 431 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 PEX5P50542 639 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 C3orf62Q6ZUJ4 267 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 RFX6Q8HWS3 928 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 SAE1Q9UBE0 346 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 MAD1L1Q9Y6D9 718 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 PECAM1P16284 738 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 TAC1P20366 129 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 SSTR1P30872 391 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 OSTNP61366 133 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 HIF1AQ16665 826 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 DNPEPQ9ULA0 475 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 ANGEL2Q5VTE6 544 aaKnown RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 SLC30A9Q6PML9 568 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 MCF2L2Q86YR7 1114 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 ARHGAP24Q8N264 748 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 DEPTORQ8TB45 409 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 SEC14L1Q92503 715 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 MCEEQ96PE7 176 aa14.14□□□□□ -0.15
SCAF4-201ENST00000286835 FHDC1Q9C0D6 1143 aaPredicted RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
SCAF4-201ENST00000286835 A0A1W2PPM1 405 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CAPN9O14815 690 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 MAP3K7O43318 606 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 PSMD10O75832 226 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ENO1P06733 434 aaKnown RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ADRA1DP25100 572 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CXCL9Q07325 125 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 FASTKD3Q14CZ7 662 aaKnown RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 SCYL2Q6P3W7 929 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CASC4Q6P4E1 433 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ZBTB33Q86T24 672 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 PDIK1LQ8N165 341 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 ZNF668Q96K58 619 aaPredicted RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 LRRC19Q9H756 370 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 SMYD3Q9H7B4 428 aa14.13□□□□□ -0.15
SCAF4-201ENST00000286835 HERC5Q9UII4 1024 aaKnown RBP14.13□□□□□ -0.15
SCAF4-201ENST00000286835 CHMP2BQ9UQN3 213 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms