RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 DSTYKQ6XUX3 929 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
CHEK1-201ENST00000278916 TMEM174Q8WUU8 243 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 BORCS6Q96GS4 357 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 TTPALQ9BTX7 342 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
CHEK1-201ENST00000278916 CHST7Q9NS84 486 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 RWDD2AQ9UIY3 292 aa12.72□□□□□ -0.37
CHEK1-201ENST00000278916 PHACTR2O75167 634 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 SPATA31D3P0C874 917 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 POU3F3P20264 500 aaPredicted RBP12.71□□□□□ -0.37
CHEK1-201ENST00000278916 PPP1R2P41236 205 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 MYL6P60660 151 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 GSE1Q14687 1217 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 STX1AQ16623 288 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 ANO6Q4KMQ2 910 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 SPATA31D4Q6ZUB0 917 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 INTS8Q75QN2 995 aaKnown RBP12.71□□□□□ -0.37
CHEK1-201ENST00000278916 PALB2Q86YC2 1186 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 NT5DC4Q86YG4 428 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 VN1R2Q8NFZ6 395 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 SUSD3Q96L08 255 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 SENP8Q96LD8 212 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 PI4K2AQ9BTU6 479 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 NGRNQ9NPE2 291 aaKnown RBP12.71□□□□□ -0.37
CHEK1-201ENST00000278916 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.37
CHEK1-201ENST00000278916 FSD2A1L4K1 749 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 TEX28O15482 410 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 HCRTO43612 131 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 LILRB3O75022 631 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 VNN1O95497 513 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 C4BPAP04003 597 aaKnown RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 FGFR3P22607 806 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 TAF6P49848 677 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 ARPP19P56211 112 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 RBP5P82980 135 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 DLX2Q07687 328 aaPredicted RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 CLUL1Q15846 466 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 PSMD5Q16401 504 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 SV2AQ7L0J3 742 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 LNX1Q8TBB1 728 aaPredicted RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 TSPAN18Q96SJ8 248 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 APOL5Q9BWW9 433 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 RBSNQ9H1K0 784 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 CLDND1Q9NY35 253 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 LMCD1Q9NZU5 365 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 ARMCX3Q9UH62 379 aaPredicted RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.38
CHEK1-201ENST00000278916 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.38
CHEK1-201ENST00000278916 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CYB561D2O14569 222 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 SLC16A3O15427 465 aaKnown RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TRAPPC3O43617 180 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CLASP2O75122 1294 aaKnown RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 OR4Q2P0C623 313 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 EPCAMP16422 314 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TFF2Q03403 129 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 ELAVL2Q12926 359 aaKnown RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TRPC3Q13507 836 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 NCOA4Q13772 614 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CBWD6Q4V339 395 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CBWD3Q5JTY5 395 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CBWD5Q5RIA9 395 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 SPOPLQ6IQ16 392 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 SCARA5Q6ZMJ2 495 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TMC2Q8TDI7 906 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TAS1R2Q8TE23 839 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 HPDLQ96IR7 371 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 KLHL5Q96PQ7 755 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CLSTN3Q9BQT9 956 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 MKNK1Q9BUB5 465 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 NXF1Q9UBU9 619 aaKnown RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 POLIQ9UNA4 740 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 R3HCC1Q9Y3T6 440 aaKnown RBP12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CDY1Q9Y6F8 540 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 TSC2P49815 1807 aa12.7□□□□□ -0.38
CHEK1-201ENST00000278916 CARNS1A5YM72 827 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
CHEK1-201ENST00000278916 M0QZQ0 153 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 MAPK13O15264 365 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 GLP2RO95838 553 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 KLRC2P26717 231 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 PIK3CAP42336 1068 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHEK1-201ENST00000278916 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 CLDN10P78369 228 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 DUSP6Q16828 381 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 ZACNQ401N2 412 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 SV2CQ496J9 727 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 FILIP1Q7Z7B0 1213 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
CHEK1-201ENST00000278916 CNOT6LQ96LI5 555 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms