RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZBED4O75132 1171 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 FDX1P10109 184 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 RTP1P59025 263 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 PIGWQ7Z7B1 504 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 GRK7Q8WTQ7 553 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 PSPC1Q8WXF1 523 aaKnown RBP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 CCT6BQ92526 530 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SEMA4DQ92854 862 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 KAT5Q92993 513 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 CCDC114Q96M63 670 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 HMX1Q9NP08 348 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 INTS9Q9NV88 658 aaKnown RBP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 H0YCG3 227 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 BACH1O14867 736 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SLC25A27O95847 323 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 GSTA1P08263 222 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 GARTP22102 1010 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SCP2P22307 547 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 MNAT1P51948 309 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 BPIFB4P59827 614 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 PTP4A2Q12974 167 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 CLEC16AQ2KHT3 1053 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 IL31RAQ8NI17 732 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 NSRP1Q9H0G5 558 aaKnown RBP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.76□□□□□ -0.21
C9orf3-201ENST00000277198 ZNF236Q9UL36 1845 aa13.76□□□□□ -0.21
C9orf3-201ENST00000277198 SMCHD1A6NHR9 2005 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 RANBP2P49792 3224 aaKnown RBP13.75□□□□□ -0.21
C9orf3-201ENST00000277198 MYH11P35749 1972 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 ATP2A1O14983 1001 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 CHUKO15111 745 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 STRNO43815 780 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 DNAJC8O75937 253 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-201ENST00000277198 NPTX2P47972 431 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 PGM5Q15124 567 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-201ENST00000277198 XKR9Q5GH70 373 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 FAM102BQ5T8I3 360 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 PPP1R2P3Q6NXS1 205 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 MDM1Q8TC05 714 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 KCNN1Q92952 543 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 MAML3Q96JK9 1138 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 TACO1Q9BSH4 297 aaKnown RBP13.75□□□□□ -0.21
C9orf3-201ENST00000277198 AZI2Q9H6S1 392 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 KIAA1586Q9HCI6 787 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 CEP290O15078 2479 aa13.75□□□□□ -0.21
C9orf3-201ENST00000277198 TLDC2A0PJX2 215 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 TCEA3O75764 348 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 MNX1P50219 401 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CYP24A1Q07973 514 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 XRCC4Q13426 336 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 AUHQ13825 339 aaKnown RBP13.74□□□□□ -0.21
C9orf3-201ENST00000277198 KCTD2Q14681 263 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SGO2Q562F6 1265 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 BBOF1Q8ND07 529 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 MAGEC3Q8TD91 643 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CRISPLD2Q9H0B8 497 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 LRRC4CQ9HCJ2 640 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 KMT5AQ9NQR1 393 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SAMD15Q9P1V8 674 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CTDP1Q9Y5B0 961 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-201ENST00000277198 DENND3A2RUS2 1198 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CCT8L1PA6NM43 557 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 ANKRD63C9JTQ0 380 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 GAS8O95995 478 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SCTRP47872 440 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CLDN10P78369 228 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CENPCQ03188 943 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 PTK6Q13882 451 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 MFSD14CQ5VZR4 134 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 LHX8Q68G74 356 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 RHBDF2Q6PJF5 856 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CEP128Q6ZU80 1094 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 RPAINQ86UA6 219 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 ABRAQ8N0Z2 381 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 GPD1LQ8N335 351 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 TAS1R2Q8TE23 839 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SGSM3Q96HU1 749 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 FGD4Q96M96 766 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SELENOSQ9BQE4 189 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
C9orf3-201ENST00000277198 PCDHB2Q9Y5E7 798 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms