RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PRAMEP78395 509 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 SNX17Q15036 470 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 TAS1R2Q8TE23 839 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 CGRRF1Q99675 332 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
NPC1-201ENST00000269228 ANKRD26Q9UPS8 1709 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 HMGB1P1B2RPK0 211 aaPredicted RBP14.45□□□□□ -0.1
NPC1-201ENST00000269228 ATP9BO43861 1147 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 SRRM1Q8IYB3 904 aaKnown RBP14.45□□□□□ -0.1
NPC1-201ENST00000269228 USP33Q8TEY7 942 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 CHMP6Q96FZ7 201 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 AGAP3Q96P47 875 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 SARS2Q9NP81 518 aaKnown RBP14.45□□□□□ -0.1
NPC1-201ENST00000269228 TFR2Q9UP52 801 aa14.45□□□□□ -0.1
NPC1-201ENST00000269228 NCAM1P13591 858 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 IFT88Q13099 833 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 DHX34Q14147 1143 aaKnown RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 PURBQ96QR8 312 aaKnown RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 USP20Q9Y2K6 914 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 ALG6Q9Y672 507 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CAPN7Q9Y6W3 813 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 SGPL1O95470 568 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CXCL8P10145 99 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 GPD1P21695 349 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 KLHL38Q2WGJ6 581 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CFAP61Q8NHU2 1237 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 SYN2Q92777 582 aaPredicted RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 NUF2Q9BZD4 464 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CYP39A1Q9NYL5 469 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 TRIM17Q9Y577 477 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 EEF2KO00418 725 aaKnown RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 TXNDC9O14530 226 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CYP24A1Q07973 514 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 NSUN2Q08J23 767 aaKnown RBP eCLIP14.44□□□□□ -0.1
NPC1-201ENST00000269228 SH2D4BQ5SQS7 431 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 NLGN2Q8NFZ4 835 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CLMNQ96JQ2 1002 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 SYT17Q9BSW7 474 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 VCXQ9H320 206 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 EHD2Q9NZN4 543 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 KNDC1Q76NI1 1749 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 ZC3H11AO75152 810 aaKnown RBP eCLIP14.44□□□□□ -0.16e-9■■□□□ 11.8
NPC1-201ENST00000269228 CASP2P42575 452 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 ALDH1A3P47895 512 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 DMTNQ08495 405 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 MFSD10Q14728 455 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 TRIM67Q6ZTA4 783 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 SEPT8Q92599 483 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 PABPC5Q96DU9 382 aaKnown RBP14.44□□□□□ -0.1
NPC1-201ENST00000269228 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 FAM118BQ9BPY3 351 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 VCX3BQ9H321 246 aa14.44□□□□□ -0.1
NPC1-201ENST00000269228 CYB561D2O14569 222 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 ACO1P21399 889 aaKnown RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 SESN2P58004 480 aaPredicted RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 C2CD6Q53TS8 623 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 KIAA0895Q8NCT3 520 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 STKLD1Q8NE28 680 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 HASPINQ8TF76 798 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 SCG3Q8WXD2 468 aaKnown RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 RAPGEF5Q92565 580 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 RAB3IPQ96QF0 476 aaPredicted RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 LRRC1Q9BTT6 524 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 PLAGL2Q9UPG8 496 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 THP07101 528 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 CYP3A4P08684 503 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 BEX3Q00994 111 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 VSIG10LQ86VR7 867 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 TMC2Q8TDI7 906 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 PHLPP1O60346 1717 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 MYL6P60660 151 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 SPATS2Q86XZ4 545 aaKnown RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 RSRC1Q96IZ7 334 aaKnown RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 YDJCA8MPS7 323 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 AP1G2O75843 785 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 UBA1P22314 1058 aaKnown RBP14.43□□□□□ -0.1
NPC1-201ENST00000269228 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 C10orf120Q5SQS8 335 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 OSBPL8Q9BZF1 889 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 SMARCAL1Q9NZC9 954 aa14.43□□□□□ -0.1
NPC1-201ENST00000269228 A0A087WUV0 522 aaPredicted RBP14.42□□□□□ -0.1
NPC1-201ENST00000269228 A0A087X0B3 334 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 A0A087X0T9 212 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 MEIS2O14770 477 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 PQBP1O60828 265 aaKnown RBP14.42□□□□□ -0.1
NPC1-201ENST00000269228 FAM228BP0C875 321 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 TAC1P20366 129 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 MAPRE1Q15691 268 aaKnown RBP14.42□□□□□ -0.1
NPC1-201ENST00000269228 SV2AQ7L0J3 742 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 CDC26Q8NHZ8 85 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 COPS5Q92905 334 aa14.42□□□□□ -0.1
NPC1-201ENST00000269228 THAP2Q9H0W7 228 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms