RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 UHMK1Q8TAS1 419 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 SUSD6Q92537 303 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 BCO2Q9BYV7 579 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 INTUQ9ULD6 942 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TMEM265A0A087WTH1 108 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 NFKBIEO00221 500 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SLC26A4O43511 780 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 MOCS2O96007 188 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 HSD17B4P51659 736 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 PRKAA1Q13131 559 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PUS10Q3MIT2 529 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 CEP55Q53EZ4 464 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 SGMS1Q86VZ5 419 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 STAG2Q8N3U4 1231 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 CERS5Q8N5B7 392 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 PPWD1Q96BP3 646 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 RUNDC3BQ96NL0 473 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 EPAS1Q99814 870 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 LSM14BQ9BX40 385 aaKnown RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 MIR1-1HGQ9H1L0 117 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 CHST12Q9NRB3 414 aa8.23□□□□□ -1.09
USP3-201ENST00000268049 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 GPN3Q9UHW5 284 aaPredicted RBP8.23□□□□□ -1.09
USP3-201ENST00000268049 H0Y626 953 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 SELPP16109 830 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 CD58P19256 250 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 C10orf120Q5SQS8 335 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 KIAA1324Q6UXG2 1013 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 GPR142Q7Z601 462 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 TEX9Q8N6V9 391 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 BBOF1Q8ND07 529 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 CEP19Q96LK0 163 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 FANCEQ9HB96 536 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 CNGB3Q9NQW8 809 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ATP5BP06576 529 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 CYP2C8P10632 490 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 MCF2P10911 925 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 PDHBP11177 359 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 MAP4P27816 1152 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 TCF7P36402 384 aaPredicted RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 NR5A1Q13285 461 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 TRIM60Q495X7 471 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ITPRIPL1Q6GPH6 555 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ERICH1Q86X53 443 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 DNAAF3Q8N9W5 541 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ASAP3Q8TDY4 903 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 VPS39Q96JC1 886 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 SCYL1Q96KG9 808 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 MED15Q96RN5 788 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 CYTH2Q99418 400 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ZCCHC17Q9NP64 241 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 ASNSD1Q9NWL6 643 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 SCHIP1Q9P0W5 487 aaPredicted RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 BAG5Q9UL15 447 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 GOLGA8QA0A0J9YX86 632 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 GOLGA8OA6NCC3 632 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 GOLGA8NF8WBI6 632 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ATP5HO75947 161 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 THP07101 528 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 BRAFP15056 766 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ACADSBP45954 432 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 PMS1P54277 932 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 OLFML2BQ68BL8 750 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 AMIGO3Q86WK7 504 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ZSCAN18Q8TBC5 510 aaPredicted RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 ZNF653Q96CK0 615 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 FSD1LQ9BXM9 530 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 FAM129AQ9BZQ8 928 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ABCF3Q9NUQ8 709 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 GIMAP4Q9NUV9 329 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 BARHL2Q9NY43 387 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 KIAA1468Q9P260 1216 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 SAE1Q9UBE0 346 aaPredicted RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 AMFRQ9UKV5 643 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 TMX2Q9Y320 296 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 AK9Q5TCS8 1911 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ALS2Q96Q42 1657 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 SFI1A8K8P3 1242 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ERN1O75460 977 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 NPTXRO95502 500 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 ADORA2BP29275 332 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 THOP1P52888 689 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 RAD23BP54727 409 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 NLRP11P59045 1033 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 USP4Q13107 963 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 MFSD4BQ5TF39 518 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 FLCNQ8NFG4 579 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 HPS3Q969F9 1004 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 MOV10L1Q9BXT6 1211 aaKnown RBP8.22□□□□□ -1.09
USP3-201ENST00000268049 TUFT1Q9NNX1 390 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 FGFR1OP2Q9NVK5 253 aa8.22□□□□□ -1.09
USP3-201ENST00000268049 RGL1Q9NZL6 768 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms