RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RFC5P40937 340 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 NOMO3P69849 1222 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 SH3D19Q5HYK7 790 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 LIN9Q5TKA1 542 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 MMS22LQ6ZRQ5 1243 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 CCDC50Q8IVM0 306 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 ASIC3Q9UHC3 531 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 USTQ9Y2C2 406 aa13.73□□□□□ -0.21
CPSF6-201ENST00000266679 ADGRA2Q96PE1 1338 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 IGKV6D-21A0A0A0MT36 114 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 PROSCO94903 275 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 FAM107AO95990 144 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TNFSF9P41273 254 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 LIG3P49916 1009 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 CALCOCO2Q13137 446 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 NCOA4Q13772 614 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TRIP13Q15645 432 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 ABRAQ8N0Z2 381 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 SELENOSQ9BQE4 189 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 NRBP2Q9NSY0 501 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 MARK3P27448 753 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TCF7P36402 384 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 SLC1A1P43005 524 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 IREB2P48200 963 aaKnown RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 STAT5BP51692 787 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 FAM160B1Q5W0V3 765 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TADA2BQ86TJ2 420 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 PAGR1Q9BTK6 254 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 DCLK3Q9C098 648 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
CPSF6-201ENST00000266679 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPSF6-201ENST00000266679 A0A087WUV0 522 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 GMNCA6NCL1 334 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 RGS16O15492 202 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 RIPK2O43353 540 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 ADCY3O60266 1144 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 KIAA0754O94854 1291 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 SLCO1A2P46721 670 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 TM4SF4P48230 202 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 TAS2R40P59535 323 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 SLMAPQ14BN4 828 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 TARBP2Q15633 366 aaKnown RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 LY6KQ17RY6 165 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 MICALL1Q8N3F8 863 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 ZNF296Q8WUU4 475 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-201ENST00000266679 PPM1EQ8WY54 764 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 FAM118BQ9BPY3 351 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 MAF1Q9H063 256 aa13.71□□□□□ -0.21
CPSF6-201ENST00000266679 TRAPPC3O43617 180 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 RALAP11233 206 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 CD58P19256 250 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 SREBF2Q12772 1141 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 MICALCLQ6ZW33 695 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 RIOX2Q8IUF8 465 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 BRSK2Q8IWQ3 736 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 MAIP1Q8WWC4 291 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 KCNN1Q92952 543 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 CNOT10Q9H9A5 744 aaKnown RBP13.71□□□□□ -0.22
CPSF6-201ENST00000266679 KLHL11Q9NVR0 708 aa13.71□□□□□ -0.22
CPSF6-201ENST00000266679 PAEPP09466 180 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 RARGP13631 454 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 CHKAP35790 457 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 VPS41P49754 854 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 CDR1P51861 262 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 IFI35P80217 286 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 ADCY2Q08462 1091 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 MAMLD1Q13495 774 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PTK6Q13882 451 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 BYSLQ13895 437 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 QPCTQ16769 361 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 TRIM50Q86XT4 487 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SLCO2A1Q92959 643 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 PGM2Q96G03 612 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 DDX23Q9BUQ8 820 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 SPATC1LQ9H0A9 340 aa13.7□□□□□ -0.22
CPSF6-201ENST00000266679 DNAJC17Q9NVM6 304 aaKnown RBP13.7□□□□□ -0.22
CPSF6-201ENST00000266679 WHRNQ9P202 907 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms