RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FEZ2Q9UHY8 353 aaPredicted RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 KRT5P13647 590 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 NSFP46459 744 aaKnown RBP11.88□□□□□ -0.51
MSH3-201ENST00000265081 GUCY1A3Q02108 690 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 MBTD1Q05BQ5 628 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 LHX5Q9H2C1 402 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 TXNRD2Q9NNW7 524 aa11.88□□□□□ -0.51
MSH3-201ENST00000265081 COL4A4P53420 1690 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 CLDN3O15551 220 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 ECEL1O95672 775 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 HOXD8P13378 290 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 TNNI1P19237 187 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 TNFSF9P41273 254 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 AMHR2Q16671 573 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 MYCBPAPQ8TBZ2 947 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 BCAS4Q8TDM0 211 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 C3orf70A6NLC5 250 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 DCDC2CA8MYV0 355 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 EIF4BP23588 611 aaKnown RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 COPS2P61201 443 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 LY6KQ17RY6 165 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 HOOK3Q86VS8 718 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 RHOT1Q8IXI2 618 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 UBLCP1Q8WVY7 318 aaPredicted RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 ATXN2LQ8WWM7 1075 aaKnown RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 FAM107BQ9H098 131 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 COL1A2P08123 1366 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 UNCXA6NJT0 531 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 ACKR2O00590 384 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
MSH3-201ENST00000265081 TAS2R40P59535 323 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 TAP1Q03518 808 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 MPZL3Q6UWV2 235 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 FEZF2Q8TBJ5 459 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 ZNF606Q8WXB4 792 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 FAM212AQ96EL1 285 aa11.87□□□□□ -0.51
MSH3-201ENST00000265081 TMEM110-MUSTN1A8MSY1 372 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 PEX10O60683 326 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 AGTP01019 485 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ADCY2Q08462 1091 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ERMARDQ5T6L9 678 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 NLRP14Q86W24 1093 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ZNF473Q8WTR7 871 aaKnown RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 NIF3L1Q9GZT8 377 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 CHST7Q9NS84 486 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 TNFSF13BQ9Y275 285 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ATP8A1Q9Y2Q0 1164 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 C22orf31O95567 290 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 GABRB2P47870 512 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 IREB2P48200 963 aaKnown RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 IRX5P78411 483 aaPredicted RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 SNF8Q96H20 258 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 JPH2Q9BR39 696 aaPredicted RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 MROH8Q9H579 483 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 IP6K2Q9UHH9 426 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 SLC45A1Q9Y2W3 748 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 CAND2O75155 1236 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 MAGEA9P43362 315 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 HSDL1Q3SXM5 330 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 EFR3BQ9Y2G0 817 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSH3-201ENST00000265081 PCDHB4Q9Y5E5 795 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ADM5C9JUS6 153 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ASAP2O43150 1006 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ERLIN2O94905 339 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 PRKCBP05771 671 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 CALB1P05937 261 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 PLTPP55058 493 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 KRT17Q04695 432 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 TMEM270Q6UE05 265 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 POLNQ7Z5Q5 900 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ADAT2Q7Z6V5 191 aaKnown RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 FNIP1Q8TF40 1166 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 FOXP3Q9BZS1 431 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 SEMA4AQ9H3S1 761 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 MTRF1LQ9UGC7 380 aaKnown RBP11.86□□□□□ -0.51
MSH3-201ENST00000265081 LGALS13Q9UHV8 139 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 CSADQ9Y600 493 aa11.86□□□□□ -0.51
MSH3-201ENST00000265081 O00370 1275 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 IL18RAPO95256 599 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 C6orf118Q5T5N4 469 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 ARMC9Q7Z3E5 817 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
MSH3-201ENST00000265081 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
MSH3-201ENST00000265081 SLITRK1Q96PX8 696 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms