RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 CHP1Q99653 195 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 HTATIP2Q9BUP3 242 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 STK33Q9BYT3 514 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 SDCBP2Q9H190 292 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 ELAC1Q9H777 363 aaKnown RBP10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 UBN1Q9NPG3 1134 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 ACP6Q9NPH0 428 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 TBC1D13Q9NVG8 400 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 TBKBP1A7MCY6 615 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 ZC3H11AO75152 810 aaKnown RBP eCLIP10.45□□□□□ -0.742e-6■■■■□ 21.1
SNRNP40-201ENST00000263694 GFPT2O94808 682 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 PLEKP08567 350 aaPredicted RBP10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 CD58P19256 250 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 CYP3A5P20815 502 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 USP8P40818 1118 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 ASPAP45381 313 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 MFAP3P55082 362 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 GSDMDP57764 484 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 WDR5P61964 334 aaKnown RBP10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 CUL2Q13617 745 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 TMEM139Q8IV31 216 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 CCDC150Q8NCX0 1101 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 C3orf58Q8NDZ4 430 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF397Q8NF99 534 aaPredicted RBP10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 HASPINQ8TF76 798 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.45□□□□□ -0.741e-8■■■□□ 15.7
SNRNP40-201ENST00000263694 IMPG2Q9BZV3 1241 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 SMYD3Q9H7B4 428 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 DNAJB4Q9UDY4 337 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 R3HCC1Q9Y3T6 440 aaKnown RBP10.45□□□□□ -0.74
SNRNP40-201ENST00000263694 ABHD14A-ACY1A0A1B0GW23 586 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 FAM170AA1A519 330 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 ZBBXA8MT70 800 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 F8VZ95 297 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 I3L4J1 428 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 PODXLO00592 558 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 INPPL1O15357 1258 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 XPOTO43592 962 aaKnown RBP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 FGBP02675 491 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 ITGB1P05556 798 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 ACO1P21399 889 aaKnown RBP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 LRPAP1P30533 357 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 CCZ1BP86790 482 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 CCZ1P86791 482 aaPredicted RBP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 RNASELQ05823 741 aaKnown RBP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 GRIK3Q13003 919 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 PPIGQ13427 754 aaKnown RBP eCLIP10.44□□□□□ -0.745e-6■■■■□ 19.9
SNRNP40-201ENST00000263694 MTF1Q14872 753 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF667Q5HYK9 610 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 TMEM240Q5SV17 173 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 SFMBT2Q5VUG0 894 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 IRF2BP2Q7Z5L9 587 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 NPAS4Q8IUM7 802 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 ABI1Q8IZP0 508 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 URGCPQ8TCY9 931 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 TOP1MTQ969P6 601 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 PANX2Q96RD6 677 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 TSPAN18Q96SJ8 248 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 MMS19Q96T76 1030 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 EDEM3Q9BZQ6 932 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 NIF3L1Q9GZT8 377 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 SLC38A7Q9NVC3 462 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 CXXC1Q9P0U4 656 aaPredicted RBP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 SNX9Q9Y5X1 595 aa10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNRNP40-201ENST00000263694 SOWAHDA6NJG2 315 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 CYP26A1O43174 497 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 HCRTO43612 131 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 KRT5P13647 590 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 ATICP31939 592 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 CLCN1P35523 988 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 SOX5P35711 763 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PBX3P40426 434 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 STAT1P42224 750 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 LILRA4P59901 499 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 GCNT1Q02742 428 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 MYO1EQ12965 1108 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 ORC1Q13415 861 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TUSC3Q13454 348 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 ASIC2Q16515 512 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 UPP1Q16831 310 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 CD300LGQ6UXG3 332 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 SHC3Q92529 594 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TAF4BQ92750 862 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 IQCDQ96DY2 449 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 BAG1Q99933 345 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 NRDE2Q9H7Z3 1164 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 ARHGAP20Q9P2F6 1191 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 COL4A6Q14031 1691 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 KPNA7A9QM74 516 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 NT5C1B-RDH14C9J2C7 533 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 DGKIO75912 1065 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 AMHP03971 560 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PFKMP08237 780 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 BRCC3P46736 316 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms