RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 TMX2Q9Y320 296 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 FAM47DPA6NHR8 397 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 TTC4O95801 387 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 ELF3P78545 371 aaPredicted RBP17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 PDIK1LQ8N165 341 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 NQO1P15559 274 aaKnown RBP17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 CNGA2Q16280 664 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 LVRNQ6Q4G3 990 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 ZNF572Q7Z3I7 529 aaPredicted RBP17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 TRIM11Q96F44 468 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 NINJ2Q9NZG7 142 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 HACL1Q9UJ83 578 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 PCDHB2Q9Y5E7 798 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 COL18A1P39060 1754 aa17.11■□□□□ 0.33
PDZRN3-201ENST00000263666 MYH14Q7Z406 1995 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 RFX1P22670 979 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 NCOA4Q13772 614 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 KCTD2Q14681 263 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 SLC9A2Q9UBY0 812 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 FBXO40Q9UH90 709 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 CBX6O95503 412 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 GGPS1O95749 300 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 KRT4P19013 534 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 JAK3P52333 1124 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 COPS2P61201 443 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 SIAH1Q8IUQ4 282 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 RPS6KC1Q96S38 1066 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 PPARGC1AQ9UBK2 798 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 DNPEPQ9ULA0 475 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 IGLV3-22A0A075B6J6 115 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 TNNC2P02585 160 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 SSTR1P30872 391 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 HIF1AQ16665 826 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 APBB1IPQ7Z5R6 666 aaPredicted RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 LONP2Q86WA8 852 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 SYTL5Q8TDW5 730 aaPredicted RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 JPH1Q9HDC5 661 aaPredicted RBP17.1■□□□□ 0.33
PDZRN3-201ENST00000263666 MCF2LO15068 1137 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 CST8O60676 142 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 PEX10O60683 326 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 TOM1L1O75674 476 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 YARSP54577 528 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 NLRP11P59045 1033 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 KIF22Q14807 665 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 PCNX4Q63HM2 1172 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 C3orf62Q6ZUJ4 267 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 RASGEF1CQ8N431 466 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 AGAP11Q8TF27 550 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 MKL1Q969V6 931 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 HEXIM2Q96MH2 286 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 CES2O00748 559 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 ESRRAP11474 423 aaPredicted RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 ECHS1P30084 290 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 CIITAP33076 1130 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 LMNB2Q03252 620 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 GPAT2Q6NUI2 795 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 MIS18BP1Q6P0N0 1132 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 FHDC1Q9C0D6 1143 aaPredicted RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 METTL5Q9NRN9 209 aaKnown RBP17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 FNTAP49354 379 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 DAW1Q8N136 415 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 AGR3Q8TD06 166 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 SHCBP1LQ9BZQ2 653 aa17.09■□□□□ 0.33
PDZRN3-201ENST00000263666 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 RGS7P49802 495 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 RPL7AP62424 266 aaKnown RBP17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 ZNF699Q32M78 642 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 C11orf63Q6NUN7 778 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 ZDHHC24Q6UX98 284 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 MFSD7Q6UXD7 560 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 MCOLN2Q8IZK6 566 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 RPTORQ8N122 1335 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 FAF2Q96CS3 445 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 SCINQ9Y6U3 715 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 PDE4DIPQ5VU43 2346 aa17.08■□□□□ 0.33
PDZRN3-201ENST00000263666 AHDC1Q5TGY3 1603 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 UBE4BO95155 1302 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 GYG2O15488 501 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 SNX3O60493 162 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 LRRC36Q1X8D7 754 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM71DQ8N9W8 422 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 PGM2Q96G03 612 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 OSBPL1AQ9BXW6 950 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 AGO4Q9HCK5 861 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms