RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 NAF1Q96HR8 494 aaKnown RBP16.64■□□□□ 0.25
SHANK3-201ENST00000262795 THAP9Q9H5L6 903 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 PALMO75781 387 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 FGFR2P21802 821 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 CCNE1P24864 410 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 ARL4CP56559 192 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 SNAP47Q5SQN1 464 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 KRT39Q6A163 491 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 MED15Q96RN5 788 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 GIMAP4Q9NUV9 329 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 NCKAP1Q9Y2A7 1128 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 SMTNL2Q2TAL5 461 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 FAM124AQ86V42 546 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 KCNV2Q8TDN2 545 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 MCEEQ96PE7 176 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 DPP3Q9NY33 737 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 NPC1L1Q9UHC9 1359 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 PLD1Q13393 1074 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 ADA2Q9NZK5 511 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 RALGDSQ12967 914 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 NAA30Q147X3 362 aaPredicted RBP16.64■□□□□ 0.25
SHANK3-201ENST00000262795 DACH2Q96NX9 599 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 PARD6BQ9BYG5 372 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 COPS7BQ9H9Q2 264 aaPredicted RBP16.64■□□□□ 0.25
SHANK3-201ENST00000262795 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
SHANK3-201ENST00000262795 F5H5T6 163 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 DDX39BQ13838 428 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 FLOT2Q14254 428 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 TJAP1Q5JTD0 557 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 ZNF697Q5TEC3 545 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 DEFB118Q96PH6 123 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 ASPSCR1Q9BZE9 553 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 N6AMT1Q9Y5N5 214 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 MAPK13O15264 365 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 SKA1Q96BD8 255 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NCF1BA6NI72 391 aaPredicted RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NCF1CA8MVU1 366 aaPredicted RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 SKIP12755 728 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NCF1P14598 390 aaPredicted RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 KLRK1P26718 216 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 CYP2C19P33261 490 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 EIF3EP60228 445 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 PDIA6Q15084 440 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 FAM171A1Q5VUB5 890 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 GSPT2Q8IYD1 628 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 YIPF3Q9GZM5 350 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 CYB561D2O14569 222 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 HPGDP15428 266 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 BRD2P25440 801 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NUP93Q8N1F7 819 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 C1orf54Q8WWF1 131 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 HPDLQ96IR7 371 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NEUROD4Q9HD90 331 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 ACAD11Q709F0 780 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 C16orf59Q7L2K0 433 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 NSUN4Q96CB9 384 aaKnown RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 TRIM15Q9C019 465 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 VPS28Q9UK41 221 aa16.63■□□□□ 0.25
SHANK3-201ENST00000262795 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
SHANK3-201ENST00000262795 AP1G2O75843 785 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 GUCA1CO95843 209 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 VN1R5Q7Z5H4 357 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 FAM118BQ9BPY3 351 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 MOV10L1Q9BXT6 1211 aaKnown RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PACSIN2Q9UNF0 486 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 DYTNA2CJ06 578 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 VCLP18206 1134 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 ALDH18A1P54886 795 aaKnown RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 ALDH6A1Q02252 535 aaKnown RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 NEK9Q8TD19 979 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PARVAQ9NVD7 372 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 MTMR4Q9NYA4 1195 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 KRT80Q6KB66 452 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 RSPH9Q9H1X1 276 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 LY9Q9HBG7 655 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 OPLAHO14841 1288 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 LARGE1O95461 756 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PDHA1P08559 390 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 BLOC1S5Q8TDH9 187 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 EFHD1Q9BUP0 239 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 MOXD2PA6NHM9 499 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 SYCE1LA8MT33 242 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 AKAP5P24588 427 aa16.62■□□□□ 0.25
SHANK3-201ENST00000262795 HIRAP54198 1017 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 ACTN3Q08043 901 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■□ 24.3
SHANK3-201ENST00000262795 MTG1Q9BT17 334 aaPredicted RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 ALG13Q9NP73 1137 aaKnown RBP16.62■□□□□ 0.25
SHANK3-201ENST00000262795 MID2Q9UJV3 735 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms