RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 ETFBP38117 255 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 P3H1Q32P28 736 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 HS6ST3Q8IZP7 471 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 DNAJC7Q99615 494 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 ALDH8A1Q9H2A2 487 aaPredicted RBP14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 GPRC5DQ9NZD1 345 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 CCDC188H7C350 402 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 H2AFYO75367 372 aaKnown RBP14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 AP1G2O75843 785 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 CXCR5P32302 372 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 FOXD4Q12950 439 aaPredicted RBP14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 TBC1D1Q86TI0 1168 aaPredicted RBP14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 DDI1Q8WTU0 396 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 CPB2Q96IY4 423 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 KRT82Q9NSB4 513 aa14.27□□□□□ -0.12
PDGFRB-201ENST00000261799 WNT10BO00744 389 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 PALMO75781 387 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 PPP3CCP48454 512 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 TXNRD3Q86VQ6 643 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 STX18Q9P2W9 335 aaKnown RBP14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 SPACA6W5XKT8 324 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 STMN1P16949 149 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 CTNNB1P35222 781 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 DCAF6Q58WW2 860 aa14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.13
PDGFRB-201ENST00000261799 DYRK3O43781 588 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 GARTP22102 1010 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 CHRNA3P32297 505 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 LIG3P49916 1009 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 EIF3EP60228 445 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 TMEM8AQ9HCN3 771 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 SETD4Q9NVD3 440 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 FAM47DPA6NHR8 397 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 SLC15A5A6NIM6 579 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 AXLP30530 894 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 CLCN3P51790 818 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 MTA1Q13330 715 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 RMDN2Q96LZ7 410 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 USP32Q8NFA0 1604 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 HLA-DRAP01903 254 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 GPD1P21695 349 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 OAS2P29728 719 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 RGS4P49798 205 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 FMO2Q99518 471 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 TLR8Q9NR97 1041 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 DNAJC17Q9NVM6 304 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 MAD2L2Q9UI95 211 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 ITIH6Q6UXX5 1313 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 MFAP3LO75121 409 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 OXCT1P55809 520 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 PIGHQ14442 188 aaPredicted RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 FAM47E-STBD1D6RA91 191 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 H3BRB1 525 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 HIST2H2ACQ16777 129 aaPredicted RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 FASTKD1Q53R41 847 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 HIST2H2AA3Q6FI13 130 aa14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 TSEN34Q9BSV6 310 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 TUT1Q9H6E5 874 aaKnown RBP14.26□□□□□ -0.13
PDGFRB-201ENST00000261799 MYMKA6NI61 221 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 KCNN4O15554 427 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 KCNA2P16389 499 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 VGLL4Q14135 290 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 P2RX7Q99572 595 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 APBA2Q99767 749 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 CRLS1Q9UJA2 301 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 PCDHB5Q9Y5E4 795 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 KRT14P02533 472 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 TGFB3P10600 412 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 HMOX2P30519 316 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ATP1A2P50993 1020 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 EIF3BP55884 814 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ETF1P62495 437 aaKnown RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 CCDC38Q502W7 563 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ANKS6Q68DC2 871 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 DNAJB3Q8WWF6 145 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 APEX2Q9UBZ4 518 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 TBX20Q9UMR3 447 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF521Q96K83 1311 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 GFPT1Q06210 699 aaPredicted RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ADCY2Q08462 1091 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 PDK1Q15118 436 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 CCDC149Q6ZUS6 474 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 C17orf53Q8N3J3 647 aaPredicted RBP14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 UBA3Q8TBC4 463 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 GPT2Q8TD30 523 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 BHMTQ93088 406 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ARIH2O95376 493 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ERVK-10P10266 1014 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 BRAFP15056 766 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 SGCGQ13326 291 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 FSCBQ5H9T9 825 aa14.25□□□□□ -0.13
PDGFRB-201ENST00000261799 ZNF438Q7Z4V0 828 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms