RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TEX28O15482 410 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 DLATP10515 647 aaKnown RBP18.09■□□□□ 0.49
SDCBP-201ENST00000260130 BMP6P22004 513 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 KCNA5P22460 613 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 PAX3P23760 479 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 NR2F2P24468 414 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 KLRC2P26717 231 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 TKTP29401 623 aaKnown RBP18.09■□□□□ 0.49
SDCBP-201ENST00000260130 LILRA4P59901 499 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 STIM1Q13586 685 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 CEP135Q66GS9 1140 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 PRSS55Q6UWB4 352 aaPredicted RBP18.09■□□□□ 0.49
SDCBP-201ENST00000260130 PPFIBP1Q86W92 1011 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 VN1R2Q8NFZ6 395 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 FNIP2Q9P278 1114 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 FRMD4BQ9Y2L6 1034 aa18.09■□□□□ 0.49
SDCBP-201ENST00000260130 SYN3O14994 580 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 GLP2RO95838 553 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 PPP1R2P41236 205 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 AARSP49588 968 aaKnown RBP eCLIP18.08■□□□□ 0.49
SDCBP-201ENST00000260130 CASP4P49662 377 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 CREMQ03060 361 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 TFF2Q03403 129 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 DLX2Q07687 328 aaPredicted RBP18.08■□□□□ 0.49
SDCBP-201ENST00000260130 ADAM9Q13443 819 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 DUOXA2Q1HG44 320 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 LMBRD2Q68DH5 695 aaPredicted RBP18.08■□□□□ 0.49
SDCBP-201ENST00000260130 TMEM184AQ6ZMB5 413 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 WDR49Q8IV35 697 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.08■□□□□ 0.49
SDCBP-201ENST00000260130 C1orf127Q8N9H9 656 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 ATXN2LQ8WWM7 1075 aaKnown RBP18.08■□□□□ 0.49
SDCBP-201ENST00000260130 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 PYCARDQ9ULZ3 195 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 HCFC2Q9Y5Z7 792 aa18.08■□□□□ 0.49
SDCBP-201ENST00000260130 PTPRJQ12913 1337 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 ADH1AP07327 375 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 TNNI1P19237 187 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 NDUFV1P49821 464 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 PSMD5Q16401 504 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 LLGL2Q6P1M3 1020 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 TRIML1Q8N9V2 468 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 FAM84AQ96KN4 292 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
SDCBP-201ENST00000260130 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 ITGA11Q9UKX5 1188 aa18.08■□□□□ 0.48
SDCBP-201ENST00000260130 ANK1P16157 1881 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 M0QZQ0 153 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 TBX10O75333 385 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 TNNC2P02585 160 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 ITGB3P05106 788 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 SRGAP2BP0DMP2 458 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 DSTYKQ6XUX3 929 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 ANKS3Q6ZW76 656 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 DHTKD1Q96HY7 919 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 CGRRF1Q99675 332 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 TSG101Q99816 390 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 CLEC1BQ9P126 229 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 AGAP1Q9UPQ3 857 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 H3BQ06 376 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 PSMA7O14818 248 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 MAPK13O15264 365 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 SPTLC1O15269 473 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 CD44P16070 742 aaKnown RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 RPL17P18621 184 aaKnown RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 POLR2BP30876 1174 aaKnown RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 CLCN4P51793 760 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 AAK1Q2M2I8 961 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 ANKRD40Q6AI12 368 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 DRC7Q8IY82 874 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 APPL2Q8NEU8 664 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 CXorf38Q8TB03 319 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 PARD3BQ8TEW8 1205 aa18.07■□□□□ 0.48
SDCBP-201ENST00000260130 BARX2Q9UMQ3 279 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-201ENST00000260130 PPP1R3GB7ZBB8 358 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 AKAP3O75969 853 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 CCNE1P24864 410 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 PNPLA4P41247 253 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 TAF6P49848 677 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 ZNF165P49910 485 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 RBP5P82980 135 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 VARS2Q5ST30 1063 aaKnown RBP18.06■□□□□ 0.48
SDCBP-201ENST00000260130 PLEKHO2Q8TD55 490 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 CASP10Q92851 521 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 CLSTN3Q9BQT9 956 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 TRIM5Q9C035 493 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 KRT19P08727 400 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 EPCAMP16422 314 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 PSMC2P35998 433 aaKnown RBP18.06■□□□□ 0.48
SDCBP-201ENST00000260130 ZNF75DP51815 510 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 PMS1P54277 932 aaKnown RBP18.06■□□□□ 0.48
SDCBP-201ENST00000260130 LRRC63Q05C16 580 aa18.06■□□□□ 0.48
SDCBP-201ENST00000260130 MRPL58Q14197 206 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms