RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 SREBF1P36956 1147 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 MFAP3P55082 362 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 PTP4A2Q12974 167 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 P3H1Q32P28 736 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 WDR72Q3MJ13 1102 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ACAD10Q6JQN1 1059 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 SLC47A2Q86VL8 602 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 KCND2Q9NZV8 630 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ATXN10Q9UBB4 475 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 DCTN4Q9UJW0 460 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 R3HDM2Q9Y2K5 976 aaKnown RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 COMMD3-BMI1R4GMX3 469 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 PENKP01210 267 aaPredicted RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 FGFR1P11362 822 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ESRRAP11474 423 aaPredicted RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 RAP1GDS1P52306 607 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ARFIP2P53365 341 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 DLG4P78352 724 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 MCL1Q07820 350 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 PPP3CAQ08209 521 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 MAPK6Q16659 721 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 ODR4Q5SWX8 454 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 GSTA5Q7RTV2 222 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 CLEC10AQ8IUN9 316 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 HAPLN3Q96S86 360 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 IWS1Q96ST2 819 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 HSD17B14Q9BPX1 270 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
TROAP-201ENST00000257909 VPS11Q9H270 941 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 TAS2R1Q9NYW7 299 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 DNAJB4Q9UDY4 337 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 NUMBLQ9Y6R0 609 aa12.16□□□□□ -0.46
TROAP-201ENST00000257909 A0A0G2JND7 137 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 PMM2O15305 246 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 TM9SF1O15321 606 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 TGDSO95455 350 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
TROAP-201ENST00000257909 CYP11B1P15538 503 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 KRT4P19013 534 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 CDK16Q00536 496 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 DSG1Q02413 1049 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 ZBTB16Q05516 673 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 THOC5Q13769 683 aaKnown RBP12.15□□□□□ -0.46
TROAP-201ENST00000257909 DDB1Q16531 1140 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 SYDE2Q5VT97 1194 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 STKLD1Q8NE28 680 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 SHC3Q92529 594 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 SKA1Q96BD8 255 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
TROAP-201ENST00000257909 HERPUD2Q9BSE4 406 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 MIS12Q9H081 205 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 TMCO1Q9UM00 188 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 PHF24Q9UPV7 400 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 DNALI1O14645 258 aaPredicted RBP12.15□□□□□ -0.46
TROAP-201ENST00000257909 NDC80O14777 642 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 MAGEC1O60732 1142 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 RALAP11233 206 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 ADSSP30520 456 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 GCLMP48507 274 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 CDK7P50613 346 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 LIN52Q52LA3 116 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 RINLQ6ZS11 566 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 TPH2Q8IWU9 490 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 KBTBD2Q8IY47 623 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 TMEM174Q8WUU8 243 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 KAT5Q92993 513 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 MAK16Q9BXY0 300 aaKnown RBP12.15□□□□□ -0.46
TROAP-201ENST00000257909 VPS37BQ9H9H4 285 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 LMCD1Q9NZU5 365 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 FETUBQ9UGM5 382 aa12.15□□□□□ -0.46
TROAP-201ENST00000257909 A0A1W2PPM1 405 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 ATP2A1O14983 1001 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 RARBP10826 455 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 PGM1P36871 562 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 PABPC1LQ4VXU2 614 aaKnown RBP12.14□□□□□ -0.47
TROAP-201ENST00000257909 C6orf163Q5TEZ5 329 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 FAM91A1Q658Y4 838 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 C15orf52Q6ZUT6 534 aaKnown RBP12.14□□□□□ -0.47
TROAP-201ENST00000257909 LCA5Q86VQ0 697 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.14□□□□□ -0.47
TROAP-201ENST00000257909 ALKBH8Q96BT7 664 aaKnown RBP12.14□□□□□ -0.47
TROAP-201ENST00000257909 STRA6Q9BX79 667 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 MANSC1Q9H8J5 431 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 AVENQ9NQS1 362 aaPredicted RBP12.14□□□□□ -0.47
TROAP-201ENST00000257909 SRP68Q9UHB9 627 aaKnown RBP12.14□□□□□ -0.47
TROAP-201ENST00000257909 GAKO14976 1311 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 SLITRK3O94933 977 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
TROAP-201ENST00000257909 CRABP2P29373 138 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms