RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 ANKEF1Q9NU02 776 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 COQ4Q9Y3A0 265 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 LRRD1A4D1F6 860 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 RASA4BC9J798 803 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 RASA4O43374 803 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 GPS1Q13098 491 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 DCUN1D2Q6PH85 259 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 MICALL2Q8IY33 904 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 RMDN2Q96LZ7 410 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 SLCO1B3Q9NPD5 702 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 PGAP2Q9UHJ9 254 aa22.62■■□□□ 1.21
TRIM28-201ENST00000253024 MAP3K6O95382 1288 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 PSAPP07602 524 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 ATP4AP20648 1035 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 SFNP31947 248 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 CUL2Q13617 745 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 TMEM132AQ24JP5 1023 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 MIS18BP1Q6P0N0 1132 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 KIAA1683Q9H0B3 1180 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 R3HDMLQ9H3Y0 253 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 HOMER3Q9NSC5 361 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 STK32BQ9NY57 414 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 ZBTB7AO95365 584 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 RAP1GAPP47736 663 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 DNAJC3Q13217 504 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 CRELD2Q6UXH1 353 aaPredicted RBP22.61■■□□□ 1.21
TRIM28-201ENST00000253024 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
TRIM28-201ENST00000253024 ZNFX1Q9P2E3 1918 aaKnown RBP22.6■■□□□ 1.21
TRIM28-201ENST00000253024 GGPS1O95749 300 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 ARSEP51690 589 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 TFAMQ00059 246 aaKnown RBP22.6■■□□□ 1.21
TRIM28-201ENST00000253024 FAM83AQ86UY5 434 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 THNSL1Q8IYQ7 743 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 ATL2Q8NHH9 583 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 SGSM3Q96HU1 749 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 ATP8B3O60423 1300 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 DGAT1O75907 488 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 MTA2O94776 668 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 PROSCO94903 275 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 LYPLA2O95372 231 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 CD19P15391 556 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 KRT15P19012 456 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 GLRA2P23416 452 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 ACCSLQ4AC99 568 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 EMC1Q8N766 993 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 CEP120Q8N960 986 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 RUNDC3BQ96NL0 473 aa22.6■■□□□ 1.21
TRIM28-201ENST00000253024 STBD1O95210 358 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 KRT19P08727 400 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 EFTUD2Q15029 972 aaKnown RBP eCLIP22.59■■□□□ 1.213e-14■■■■■ 79.4
TRIM28-201ENST00000253024 ZACNQ401N2 412 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 MON1BQ7L1V2 547 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 LPAR1Q92633 364 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 ACTR5Q9H9F9 607 aaPredicted RBP22.59■■□□□ 1.21
TRIM28-201ENST00000253024 PCSK1NQ9UHG2 260 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 CNOT7Q9UIV1 285 aaKnown RBP22.59■■□□□ 1.21
TRIM28-201ENST00000253024 KAT6AQ92794 2004 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 TBC1D12O60347 775 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 SNX3O60493 162 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 KCNA3P22001 575 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 NOMO3P69849 1222 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 ELF3P78545 371 aaPredicted RBP22.59■■□□□ 1.21
TRIM28-201ENST00000253024 OGDHQ02218 1023 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 NCOA4Q13772 614 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 USP37Q86T82 979 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 ZBED8Q8IZ13 594 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 NSUN6Q8TEA1 469 aaKnown RBP22.59■■□□□ 1.21
TRIM28-201ENST00000253024 TRAPPC12Q8WVT3 735 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 CNKSR2Q8WXI2 1034 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 ECT2Q9H8V3 914 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 EXOC1LA0A1B0GW35 172 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 SGK1O00141 431 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 EXTL3O43909 919 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 C4BPAP04003 597 aaKnown RBP22.59■■□□□ 1.21
TRIM28-201ENST00000253024 ITIH2P19823 946 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 MYL6P60660 151 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 LIN9Q5TKA1 542 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 PIGWQ7Z7B1 504 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 TMC2Q8TDI7 906 aa22.59■■□□□ 1.21
TRIM28-201ENST00000253024 PLA2G6O60733 806 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 GCNT1Q02742 428 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 RHOT1Q8IXI2 618 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.58■■□□□ 1.21
TRIM28-201ENST00000253024 FBXL18Q96ME1 805 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 TRAIPQ9BWF2 469 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 ST6GALNAC4Q9H4F1 302 aa22.58■■□□□ 1.21
TRIM28-201ENST00000253024 RNASELQ05823 741 aaKnown RBP22.58■■□□□ 1.2
TRIM28-201ENST00000253024 RHBDF2Q6PJF5 856 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 TRMT10CQ7L0Y3 403 aaKnown RBP22.58■■□□□ 1.2
TRIM28-201ENST00000253024 NIPA1Q7RTP0 329 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 ANKRD35Q8N283 1001 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 ZNF606Q8WXB4 792 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 WHRNQ9P202 907 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 SYNPO2Q9UMS6 1093 aa22.58■■□□□ 1.2
TRIM28-201ENST00000253024 PECAM1P16284 738 aaPredicted RBP22.57■■□□□ 1.2
TRIM28-201ENST00000253024 ACO1P21399 889 aaKnown RBP22.57■■□□□ 1.2
TRIM28-201ENST00000253024 FOXN2P32314 431 aa22.57■■□□□ 1.2
TRIM28-201ENST00000253024 MAP2K2P36507 400 aa22.57■■□□□ 1.2
TRIM28-201ENST00000253024 MAGEA4P43358 317 aa22.57■■□□□ 1.2
TRIM28-201ENST00000253024 NFX1Q12986 1120 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms