RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CD248Q9HCU0 757 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 SAR1AQ9NR31 198 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 FZD9O00144 591 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 AHCYL1O43865 530 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 FMO1Q01740 532 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 DRAP1Q14919 205 aaPredicted RBP4.4□□□□□ -1.71
UBE4A-201ENST00000252108 ZC2HC1CQ53FD0 456 aaPredicted RBP4.4□□□□□ -1.71
UBE4A-201ENST00000252108 ST13P4Q8IZP2 240 aaPredicted RBP4.4□□□□□ -1.71
UBE4A-201ENST00000252108 CHURC1Q8WUH1 139 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF516Q92618 1163 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF653Q96CK0 615 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 FAM212AQ96EL1 285 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 BICD1Q96G01 975 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 TRIM55Q9BYV6 548 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 FRMD8Q9BZ67 464 aaPredicted RBP4.4□□□□□ -1.71
UBE4A-201ENST00000252108 MCM3APO60318 1980 aa4.4□□□□□ -1.71
UBE4A-201ENST00000252108 CNTNAP2Q9UHC6 1331 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 FAM47DPA6NHR8 397 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 C6orf229H3BNL8 230 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CCDC22O60826 627 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SPAG6O75602 509 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 TCEA3O75764 348 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ITGA4P13612 1032 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CHRNA5P30532 468 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 MAPK4P31152 587 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 MSH2P43246 934 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 IFNAR2P48551 515 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CACNB1Q02641 598 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SH3D19Q5HYK7 790 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 DNAAF5Q86Y56 855 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF276Q8N554 614 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SLC35G2Q8TBE7 412 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SYTL5Q8TDW5 730 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SPIRE2Q8WWL2 714 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 KAT2BQ92831 832 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 DCLRE1BQ9H816 532 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 GTF3C4Q9UKN8 822 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 IQANK1A0A1B0GTG1 560 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 F8W031 263 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 WNT10BO00744 389 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 GAS7O60861 476 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ATP9AO75110 1047 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 GDF11O95390 407 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ANP32DO95626 131 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ABHD2P08910 425 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 TSHRP16473 764 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PROZP22891 400 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 NMT1P30419 496 aaKnown RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ACVR2BQ13705 512 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 RASA3Q14644 834 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 MESDQ14696 234 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PGM5Q15124 567 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 BRDTQ58F21 947 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ATG16L1Q676U5 607 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 KCNV1Q6PIU1 500 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PPP1R14CQ8TAE6 165 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CCT6BQ92526 530 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 DYDC2Q96IM9 177 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ZSWIM1Q9BR11 485 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 BHMT2Q9H2M3 363 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 C1orf112Q9NSG2 853 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ZFATQ9P243 1243 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 HTTP42858 3142 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 IGKV6-21A0A0C4DH24 114 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 EXOC1LA0A1B0GW35 172 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 TISP43B9A030 160 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 GCAP28676 217 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ICAM3P32942 547 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 COILP38432 576 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SERPINB4P48594 390 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 MXI1P50539 228 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 BFSP1Q12934 665 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PICALMQ13492 652 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 HADHQ16836 314 aaKnown RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 TKFCQ3LXA3 575 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CMPK2Q5EBM0 449 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 LBX2Q6XYB7 198 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CPNE8Q86YQ8 564 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 LRRC34Q8IZ02 419 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PRELID2Q8N945 189 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ETNK1Q9HBU6 452 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 OSGEPQ9NPF4 335 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 CNOT8Q9UFF9 292 aaKnown RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 C3orf70A6NLC5 250 aaPredicted RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 NFIBO00712 420 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 IRF6O14896 467 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SNX3O60493 162 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 POLR2BP30876 1174 aaKnown RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 VHLP40337 213 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 NSFP46459 744 aaKnown RBP4.39□□□□□ -1.71
UBE4A-201ENST00000252108 SNAP25P60880 206 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ZNF252P-AS1Q0IIN9 211 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 ARHGAP44Q17R89 818 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 DNAL1Q4LDG9 190 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 MAML3Q96JK9 1138 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 TRAPPC9Q96Q05 1148 aa4.39□□□□□ -1.71
UBE4A-201ENST00000252108 PCYT2Q99447 389 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms