RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 BRCC3P46736 316 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 RCAN1P53805 252 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 IRX4P78413 519 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 GRSF1Q12849 480 aaKnown RBP eCLIP13.18□□□□□ -0.3
RFPL3-201ENST00000249007 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 VAV3Q9UKW4 847 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 KIF26AQ9ULI4 1882 aaPredicted RBP13.18□□□□□ -0.3
RFPL3-201ENST00000249007 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 A0A1W2PRU2 124 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 FAM221BA6H8Z2 402 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 ZBTB39O15060 712 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 PLCB2Q00722 1185 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 AKAP17AQ02040 695 aaKnown RBP13.17□□□□□ -0.3
RFPL3-201ENST00000249007 UPP1Q16831 310 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 ITPRIPL2Q3MIP1 535 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 TMEM196Q5HYL7 178 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 CYP2U1Q7Z449 544 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 CHCHD4Q8N4Q1 142 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 C3orf58Q8NDZ4 430 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 VPS54Q9P1Q0 977 aa13.17□□□□□ -0.3
RFPL3-201ENST00000249007 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
RFPL3-201ENST00000249007 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PRPF3O43395 683 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 RNF40O75150 1001 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 APBB3O95704 486 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 GLRA2P23416 452 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 ARL2P36404 184 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 SCAPQ12770 1279 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PTPAQ15257 358 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 TMEM132AQ24JP5 1023 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 STXBP5Q5T5C0 1151 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 FSTL4Q6MZW2 842 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 NOSTRINQ8IVI9 506 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 UROC1Q96N76 676 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 LSG1Q9H089 658 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 GOLGA2P5Q9HBQ8 144 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 RGL1Q9NZL6 768 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 EBF1Q9UH73 591 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 FBXL5Q9UKA1 691 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 H7C4K7 107 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 MAPK8P45983 427 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 LMAN2Q12907 356 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 ADPGKQ9BRR6 497 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PDZD7Q9H5P4 517 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 CACNA2D2Q9NY47 1150 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 AFF4Q9UHB7 1163 aaKnown RBP13.16□□□□□ -0.3
RFPL3-201ENST00000249007 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 INVSQ9Y283 1065 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
RFPL3-201ENST00000249007 LRRIQ4A6NIV6 560 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 TTLL13PA6NNM8 815 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 SYN3O14994 580 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 N4BP3O15049 544 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 SLC37A4O43826 429 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 DGAT1O75907 488 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 NLRP5P59047 1200 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 CTTNQ14247 550 aaKnown RBP13.15□□□□□ -0.3
RFPL3-201ENST00000249007 EPHA7Q15375 998 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 DHX32Q7L7V1 743 aaKnown RBP13.15□□□□□ -0.3
RFPL3-201ENST00000249007 PIP4P1Q86T03 277 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
RFPL3-201ENST00000249007 OBP2AQ9NY56 170 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 TPCN1Q9ULQ1 816 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 TRIP11Q15643 1979 aa13.15□□□□□ -0.3
RFPL3-201ENST00000249007 TRDMT1O14717 391 aaKnown RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 EGFP01133 1207 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 CPB1P15086 417 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 DGKEP52429 567 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 TRIM61Q5EBN2 209 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 TMC8Q8IU68 726 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 PIGKQ92643 395 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 DYDC2Q96IM9 177 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 CCDC43Q96MW1 224 aaKnown RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 NUSAP1Q9BXS6 441 aaKnown RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 LRRC3Q9BY71 257 aa13.14□□□□□ -0.31
RFPL3-201ENST00000249007 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
RFPL3-201ENST00000249007 KCNMB3Q9NPA1 279 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms