RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 SOX5P35711 763 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 PNPLA4P41247 253 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 KRT83P78385 493 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 CCZ1BP86790 482 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 CCZ1P86791 482 aaPredicted RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 KLHL30Q0D2K2 578 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 LRMPQ12912 555 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 DSC3Q14574 896 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 DRAP1Q14919 205 aaPredicted RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 SPA17Q15506 151 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 MEA1Q16626 185 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 TRIM60Q495X7 471 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 TDRD12Q587J7 1177 aaKnown RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 XKR4Q5GH76 650 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 LMBRD2Q68DH5 695 aaPredicted RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 LIAT1Q6ZQX7 453 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 EFCAB13Q8IY85 973 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 OR5B17Q8NGF7 314 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 PAWRQ96IZ0 340 aaKnown RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 ZNF560Q96MR9 790 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 MTMR12Q9C0I1 747 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 MCOLN1Q9GZU1 580 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 NXF3Q9H4D5 531 aaKnown RBP9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 TMEM39AQ9NV64 488 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 DPP3Q9NY33 737 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 ATP11BQ9Y2G3 1177 aa9.78□□□□□ -0.84
EXOSC9-201ENST00000243498 ESPNB1AK53 854 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 EPHB6O15197 1021 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 HOXA2O43364 376 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 AKR1B10O60218 316 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ASS1P00966 412 aaKnown RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ITGB3P05106 788 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 THP07101 528 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 NFICP08651 508 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 CCDC175P0C221 793 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 AKAP5P24588 427 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 PRKCIP41743 596 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 GCGRP47871 477 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 JAM2P57087 298 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 NOP14P78316 857 aaKnown RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 FAAP100Q0VG06 881 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ARHGAP44Q17R89 818 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ZNF699Q32M78 642 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 PLEKHG4Q58EX7 1191 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ALKAL1Q6UXT8 129 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 RPUSD2Q8IZ73 545 aaKnown RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 SMG8Q8ND04 991 aaKnown RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 SEMA4DQ92854 862 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 KCNF1Q9H3M0 494 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 ELAC1Q9H777 363 aaKnown RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 VRTNQ9H8Y1 702 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 RSAD1Q9HA92 442 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 CYP3A43Q9HB55 503 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 PRKAG2Q9UGJ0 569 aa9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 EPN1Q9Y6I3 576 aaPredicted RBP9.77□□□□□ -0.85
EXOSC9-201ENST00000243498 TDRD15B5MCY1 1934 aaKnown RBP9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 SMIM28A0A1B0GU29 152 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 ARHGEF37A1IGU5 675 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 F8VZ95 297 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 RNF225M0QZC1 329 aaPredicted RBP9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 TUBB4AP04350 444 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PFKMP08237 780 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 USP8P40818 1118 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 WNT7BP56706 349 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 TNNC1P63316 161 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PTK2Q05397 1052 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 GOLGA8FQ08AF8 430 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 GOLGA8DPQ0D2H9 430 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 CUL2Q13617 745 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 ZBTB6Q15916 424 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PKDCCQ504Y2 493 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 C10orf76Q5T2E6 689 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 DPY19L2P1Q6NXN4 242 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PPP1R2P3Q6NXS1 205 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 ECHDC2Q86YB7 292 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 KIAA1524Q8TCG1 905 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 URGCPQ8TCY9 931 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 HELQQ8TDG4 1101 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 NIF3L1Q9GZT8 377 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 NHEJ1Q9H9Q4 299 aaPredicted RBP9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 TMEM161AQ9NX61 479 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 LRFN2Q9ULH4 789 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 AGAP1Q9UPQ3 857 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 HES2Q9Y543 173 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PCDHB7Q9Y5E2 793 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 TANC1Q9C0D5 1861 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
EXOSC9-201ENST00000243498 EIF3CLB5ME19 914 aaKnown RBP9.75□□□□□ -0.85
EXOSC9-201ENST00000243498 C9IYK1 514 aa9.75□□□□□ -0.85
EXOSC9-201ENST00000243498 EFCAB14O75071 495 aa9.75□□□□□ -0.85
EXOSC9-201ENST00000243498 VNN1O95497 513 aa9.75□□□□□ -0.85
EXOSC9-201ENST00000243498 FAM163BP0C2L3 166 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms