RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PLIN2Q99541 437 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 FUT8Q9BYC5 575 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 CPVLQ9H3G5 476 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 ANKZF1Q9H8Y5 726 aa8.63□□□□□ -1.03
CXCR4-201ENST00000241393 TRPC5Q9UL62 973 aaPredicted RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 GREB1LQ9C091 1923 aaPredicted RBP8.63□□□□□ -1.03
CXCR4-201ENST00000241393 NPHP3-ACAD11A0A0J9YXS1 232 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 A0A0U1RQJ8 604 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 MYMKA6NI61 221 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 RASSF10A6NK89 507 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 PES1O00541 588 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 ZBTB5O15062 677 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 LTBRP36941 435 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 HERVK_113P62684 666 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 FKBP1AP62942 108 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 GPS2Q13227 327 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 VWA3BQ502W6 1294 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SLC35F1Q5T1Q4 408 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 FOXB2Q5VYV0 432 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 HLA-DQA1Q5Y7H0 255 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 WDR93Q6P2C0 686 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 DPP8Q6V1X1 898 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 USP53Q70EK8 1073 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 ATRIPQ8WXE1 791 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 TSG101Q99816 390 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 NT5C3AQ9H0P0 336 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 JMJD4Q9H9V9 463 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 VAT1LQ9HCJ6 419 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SLC37A4O43826 429 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 EDIL3O43854 480 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 ESR1P03372 595 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 THBDP07204 575 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 FCER1AP12319 257 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 IFNGR1P15260 489 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 NPR1P16066 1061 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SHMT1P34896 483 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 VAV2P52735 878 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 GYS2P54840 703 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 TEKQ02763 1124 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SMC1AQ14683 1233 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 BEND6Q5SZJ8 279 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 KIAA1328Q86T90 577 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 ADGRF4Q8IZF3 695 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 NINJ1Q92982 152 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 JAKMIP2Q96AA8 810 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 COA7Q96BR5 231 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 MFSD3Q96ES6 412 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 PTCHD1Q96NR3 888 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 DHX36Q9H2U1 1008 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 NDST4Q9H3R1 872 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 NHEJ1Q9H9Q4 299 aaPredicted RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SPC25Q9HBM1 224 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 USP40Q9NVE5 1235 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 TNFRSF10DQ9UBN6 386 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 PUF60Q9UHX1 559 aaKnown RBP8.62□□□□□ -1.03
CXCR4-201ENST00000241393 SIK3Q9Y2K2 1263 aa8.62□□□□□ -1.03
CXCR4-201ENST00000241393 FRMPD2Q68DX3 1309 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 NRXN2Q9P2S2 1712 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 TARSL2A2RTX5 802 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 CCDC66A2RUB6 948 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 FGF10O15520 208 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 USO1O60763 962 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 DNAJC6O75061 913 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 SEC31AO94979 1220 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 LCA5LO95447 670 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 TDP2O95551 362 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 GNA14O95837 355 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 CYP3A7P24462 503 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 ALDH1B1P30837 517 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 SPA17Q15506 151 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 TESK1Q15569 626 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 BCL7CQ8WUZ0 217 aaPredicted RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 RUBCNQ92622 972 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 DIO2Q92813 273 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 TEKT1Q969V4 418 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 PKNOX2Q96KN3 472 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 MBOAT7Q96N66 472 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 MMP19Q99542 508 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 DDX4Q9NQI0 724 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 AGPAT5Q9NUQ2 364 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 INTS7Q9NVH2 962 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 NYAP2Q9P242 653 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 DDX25Q9UHL0 483 aaKnown RBP8.61□□□□□ -1.03
CXCR4-201ENST00000241393 GUCA1BQ9UMX6 200 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 CD2APQ9Y5K6 639 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 SAR1BQ9Y6B6 198 aa8.61□□□□□ -1.03
CXCR4-201ENST00000241393 PRLRP16471 622 aa8.6□□□□□ -1.03
CXCR4-201ENST00000241393 CYP2C19P33261 490 aa8.6□□□□□ -1.03
CXCR4-201ENST00000241393 FLT3P36888 993 aa8.6□□□□□ -1.03
CXCR4-201ENST00000241393 FKBP3Q00688 224 aaKnown RBP8.6□□□□□ -1.03
CXCR4-201ENST00000241393 ITIH3Q06033 890 aa8.6□□□□□ -1.03
CXCR4-201ENST00000241393 KIF5AQ12840 1032 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms