RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 IL17REQ8NFR9 667 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 SH3GL3Q99963 347 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 hCG_1984214I3L0E3 225 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ENDOD1O94919 500 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 PRCPP42785 496 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 RANBP1P43487 201 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 RASGRF1Q13972 1273 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ZNF713Q8N859 430 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 EME1Q96AY2 570 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ZNF560Q96MR9 790 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 EPN3Q9H201 632 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 RAB6BQ9NRW1 208 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 RNF14Q9UBS8 474 aa13.83□□□□□ -0.2
NEK9-201ENST00000238616 ZNF608Q9ULD9 1512 aaPredicted RBP13.83□□□□□ -0.2
NEK9-201ENST00000238616 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 SPATA18Q8TC71 538 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 ATP7AQ04656 1500 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 KRT75O95678 551 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 PGS1Q32NB8 556 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 KRT20P35900 424 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 RGS4P49798 205 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 HMGCS2P54868 508 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 KCNB1Q14721 858 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 DIS3Q9Y2L1 958 aaKnown RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 SNX9Q9Y5X1 595 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 KDM5CP41229 1560 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 PIK3C2GO75747 1445 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 CDH2P19022 906 aaPredicted RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 GPC1P35052 558 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 BNIPLQ7Z465 357 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 GPD1LQ8N335 351 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 CNBD2Q96M20 576 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 OLFML3Q9NRN5 406 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 HAUS5O94927 633 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 FAM107AO95990 144 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 GTF2E2P29084 291 aaKnown RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 CUL4AQ13619 759 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 TAF1CQ15572 869 aaPredicted RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 GSTA3Q16772 222 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 LAYNQ6UX15 382 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
NEK9-201ENST00000238616 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 PADI4Q9UM07 663 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 IQCMA0A1B0GVH7 501 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 NCK2O43639 380 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 USP10Q14694 798 aaKnown RBP13.82□□□□□ -0.2
NEK9-201ENST00000238616 RPS6KB2Q9UBS0 482 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
NEK9-201ENST00000238616 PRPF3O43395 683 aaKnown RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 C11orf88Q6PI97 169 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 HAUS6Q7Z4H7 955 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 KATNAL1Q9BW62 490 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 OSBPL6Q9BZF3 934 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 LAMC1P11047 1609 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 RGS12O14924 1447 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 PGM1P36871 562 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 MPP6Q9NZW5 540 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 NUDT14O95848 222 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 YWHAQP27348 245 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 DDX39BQ13838 428 aaKnown RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 FOXP4Q8IVH2 680 aaPredicted RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 PANX2Q96RD6 677 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ECSITQ9BQ95 431 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 CEP72Q9P209 647 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 SPACA6W5XKT8 324 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 SYNCRIPO60506 623 aaKnown RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 RPS6KA5O75582 802 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 PLA2G4AP47712 749 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 VSNL1P62760 191 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ICE2Q659A1 982 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 TSPAN17Q96FV3 270 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 PIF1Q9H611 641 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 PCMTD2Q9NV79 361 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 TRIM65Q6PJ69 517 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 RHOT1Q8IXI2 618 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 GALNT8Q9NY28 637 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 AGAP1Q9UPQ3 857 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 F8W810 466 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 CYP21A2P08686 494 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 ST13P50502 369 aaKnown RBP13.81□□□□□ -0.2
NEK9-201ENST00000238616 NR1H3Q13133 447 aa13.81□□□□□ -0.2
NEK9-201ENST00000238616 NOL9Q5SY16 702 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms