RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SGSM1Q2NKQ1 1148 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TSHZ1Q6ZSZ6 1077 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 EEPD1Q7L9B9 569 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 RNF149Q8NC42 400 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 C3orf20Q8ND61 904 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 FEZF2Q8TBJ5 459 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 OTUD5Q96G74 571 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TCHPQ9BT92 498 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 ZNF518BQ9C0D4 1074 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TLR3O15455 904 aaKnown RBP17.2■□□□□ 0.34
UBE3D-201ENST00000237186 ITIH2P19823 946 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 IVDP26440 423 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 HPDP32754 393 aaPredicted RBP17.2■□□□□ 0.34
UBE3D-201ENST00000237186 CALCOCO2Q13137 446 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 Q3C1V9 767 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 LLGL2Q6P1M3 1020 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 RHBDF2Q6PJF5 856 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 B4GALNT4Q76KP1 1039 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 SPATS2Q86XZ4 545 aaKnown RBP17.2■□□□□ 0.34
UBE3D-201ENST00000237186 ATL2Q8NHH9 583 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 EXD1Q8NHP7 514 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 C1orf54Q8WWF1 131 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 HERPUD2Q9BSE4 406 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 DCLK3Q9C098 648 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TSPYL1Q9H0U9 437 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 SEMA4AQ9H3S1 761 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 TXNRD2Q9NNW7 524 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 PTPRFP10586 1907 aa17.2■□□□□ 0.34
UBE3D-201ENST00000237186 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 B4GALT4O60513 344 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 SHBGP04278 402 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 SRGAP2CP0DJJ0 459 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 HARSP12081 509 aaKnown RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 CDH5P33151 784 aaPredicted RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 MAGOHP61326 146 aaKnown RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 PTK6Q13882 451 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 KCTD2Q14681 263 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 PPP1R7Q15435 360 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 CCNG2Q16589 344 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 C2CD6Q53TS8 623 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 TRMT10CQ7L0Y3 403 aaKnown RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 CNOT10Q9H9A5 744 aaKnown RBP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 CHST7Q9NS84 486 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 BCCIPQ9P287 314 aaKnown RBP eCLIP17.19■□□□□ 0.34
UBE3D-201ENST00000237186 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
UBE3D-201ENST00000237186 TCRBV5S1A1TA0A578 114 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TMEM191CA6NGB0 347 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ASAP2O43150 1006 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 RIPK2O43353 540 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CAND2O75155 1236 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CALB1P05937 261 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 PGK2P07205 417 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 HOXC6P09630 235 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TMEM191BP0C7N4 346 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MYL6P60660 151 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CAV1Q03135 178 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 POU5F1BQ06416 359 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ODF2Q5BJF6 829 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 C6orf118Q5T5N4 469 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 LRRC38Q5VT99 294 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MPZL3Q6UWV2 235 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 PHLDB2Q86SQ0 1253 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ZBTB33Q86T24 672 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CENPTQ96BT3 561 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 FAXDC2Q96IV6 333 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CLMNQ96JQ2 1002 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 NFKBIZQ9BYH8 718 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MTMR12Q9C0I1 747 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 SMARCAD1Q9H4L7 1026 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MROH8Q9H579 483 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 LRRC4CQ9HCJ2 640 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 GGA2Q9UJY4 613 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 PCDHGC3Q9UN70 934 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 NEU2Q9Y3R4 380 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 HBP1O60381 514 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 FAM107AO95990 144 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MARK3P27448 753 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TAS2R40P59535 323 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 KRT17Q04695 432 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 ADCY2Q08462 1091 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TFDP1Q14186 410 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TNFAIP8L3Q5GJ75 292 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 USP50Q70EL3 339 aaPredicted RBP17.18■□□□□ 0.34
UBE3D-201ENST00000237186 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
UBE3D-201ENST00000237186 TRIM50Q86XT4 487 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 DHX37Q8IY37 1157 aaKnown RBP17.18■□□□□ 0.34
UBE3D-201ENST00000237186 LRRC71Q8N4P6 559 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 SPATA33Q96N06 139 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 CCT8L2Q96SF2 557 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 MMP19Q99542 508 aa17.18■□□□□ 0.34
UBE3D-201ENST00000237186 XYLT2Q9H1B5 865 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms