RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 TATDN2Q93075 761 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 TMEM169Q96HH4 297 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 SAMD11Q96NU1 681 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 GPR62Q9BZJ7 368 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
HMGCL-201ENST00000235958 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
HMGCL-201ENST00000235958 RWDD3Q9Y3V2 267 aa10.94□□□□□ -0.66
HMGCL-201ENST00000235958 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 CYB561D2O14569 222 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 TEX33O43247 280 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 ASS1P00966 412 aaKnown RBP10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SLC9A1P19634 815 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 PAX3P23760 479 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 PPM1AP35813 382 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 AARSP49588 968 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMGCL-201ENST00000235958 TAF6P49848 677 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 UBASH3AP57075 661 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 UBXN1Q04323 297 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 EXOC3L4Q17RC7 722 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SV2CQ496J9 727 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 FILIP1LQ4L180 1135 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 WDR44Q5JSH3 913 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 FAM171A1Q5VUB5 890 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 DSTYKQ6XUX3 929 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 GBP6Q6ZN66 633 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 DDX53Q86TM3 631 aaKnown RBP10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 ARNTL2Q8WYA1 636 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 TAF4BQ92750 862 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SENP8Q96LD8 212 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 VN1R3Q9BXE9 311 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 GDAP2Q9NXN4 497 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 NXF1Q9UBU9 619 aaKnown RBP10.93□□□□□ -0.66
HMGCL-201ENST00000235958 PUF60Q9UHX1 559 aaKnown RBP10.93□□□□□ -0.66
HMGCL-201ENST00000235958 SNX9Q9Y5X1 595 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 LAMA3Q16787 3333 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 CHD9Q3L8U1 2897 aa10.93□□□□□ -0.66
HMGCL-201ENST00000235958 A0A1B0GTH6 734 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 GTPBP10A4D1E9 387 aaKnown RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 LGALS16A8MUM7 142 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 H3BNC9 293 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 M0QZQ0 153 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 SOX1O00570 391 aaPredicted RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 SLC34A2O95436 690 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 STAU1O95793 577 aaKnown RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 PON1P27169 355 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 ELAVL2Q12926 359 aaKnown RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 GPM6BQ13491 265 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 ZNF699Q32M78 642 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 ZNF667Q5HYK9 610 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 FKBP15Q5T1M5 1219 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 FUT10Q6P4F1 479 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 VPS52Q8N1B4 723 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 CCDC150Q8NCX0 1101 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 MMS19Q96T76 1030 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 C11orf84Q9BUA3 381 aaPredicted RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 IMPG2Q9BZV3 1241 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 APOBEC3GQ9HC16 384 aaKnown RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
HMGCL-201ENST00000235958 TIMM13Q9Y5L4 95 aaPredicted RBP10.92□□□□□ -0.66
HMGCL-201ENST00000235958 SF3B1O75533 1304 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGCL-201ENST00000235958 CHD7Q9P2D1 2997 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 EPOPA6NHQ4 379 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 RFXAPO00287 272 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 GRM6O15303 877 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 AP5Z1O43299 807 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 HUS1O60921 280 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 CXCL14O95715 111 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 FGFR3P22607 806 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 DNAJB1P25685 340 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 CDH8P55286 799 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 ERVFC1P60507 584 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 NOP14P78316 857 aaKnown RBP10.91□□□□□ -0.66
HMGCL-201ENST00000235958 APBA1Q02410 837 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 LRMPQ12912 555 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 USP41Q3LFD5 358 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 KIAA0319Q5VV43 1072 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 KIAA1841Q6NSI8 718 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 PHLDB3Q6NSJ2 640 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 DPY19L2P1Q6NXN4 242 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 DPH6Q7L8W6 267 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 LIMS2Q7Z4I7 341 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 RNF168Q8IYW5 571 aaPredicted RBP10.91□□□□□ -0.66
HMGCL-201ENST00000235958 APPL2Q8NEU8 664 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
HMGCL-201ENST00000235958 B3GALT6Q96L58 329 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms