RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 PXDNQ92626 1479 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ACO1P21399 889 aaKnown RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 DDIASQ8IXT1 998 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 GMCL1Q96IK5 515 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 EHD4Q9H223 541 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 PNMA6AP0CW24 399 aaPredicted RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 CYP2C19P33261 490 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 CASP4P49662 377 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 SDE2Q6IQ49 451 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 MIB1Q86YT6 1006 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ACSF2Q96CM8 615 aaPredicted RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 TRIM55Q9BYV6 548 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 COG4Q9H9E3 785 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 APOBEC2Q9Y235 224 aaKnown RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 DIAPH2O60879 1101 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 TMCC1O94876 653 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 FGFR4P22455 802 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 GYS2P54840 703 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 AGPAT3Q9NRZ7 376 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 PCDHB2Q9Y5E7 798 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ZNF185O15231 689 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 VCPP55072 806 aaKnown RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 MAGOHP61326 146 aaKnown RBP19.4■□□□□ 0.7
CLIP2-201ENST00000223398 PHEXP78562 749 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ANKRD20A4Q4UJ75 823 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ANKRD20A8PQ5CZ79 823 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ANKRD20A2Q5SQ80 823 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ANKRD20A1Q5TYW2 823 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 ACAD11Q709F0 780 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 RAB6BQ9NRW1 208 aa19.4■□□□□ 0.7
CLIP2-201ENST00000223398 A0A087WZ62 844 aa19.39■□□□□ 0.7
CLIP2-201ENST00000223398 GRB10Q13322 594 aa19.39■□□□□ 0.7
CLIP2-201ENST00000223398 TBC1D1Q86TI0 1168 aaPredicted RBP19.39■□□□□ 0.7
CLIP2-201ENST00000223398 FDXACB1Q9BRP7 624 aaPredicted RBP19.39■□□□□ 0.7
CLIP2-201ENST00000223398 SPECC1L-ADORA2AF8WAN1 911 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 ACADSBP45954 432 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 HIF1AQ16665 826 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 DCTN4Q9UJW0 460 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 ATP8B1O43520 1251 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 DSG3P32926 999 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 SHMT1P34896 483 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 PNPLA4P41247 253 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 FBXO38Q6PIJ6 1188 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 ACOT1Q86TX2 421 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 CBWD2Q8IUF1 395 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 C1orf131Q8NDD1 294 aaKnown RBP19.39■□□□□ 0.69
CLIP2-201ENST00000223398 SEPT8Q92599 483 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 EXOC4Q96A65 974 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 PCDHB8Q9UN66 801 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 DCCP43146 1447 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 ITSN1Q15811 1721 aa19.39■□□□□ 0.69
CLIP2-201ENST00000223398 MANSC4A6NHS7 340 aaPredicted RBP19.39■□□□□ 0.69
CLIP2-201ENST00000223398 IRX2Q9BZI1 471 aaPredicted RBP19.39■□□□□ 0.69
CLIP2-201ENST00000223398 ALG13Q9NP73 1137 aaKnown RBP19.39■□□□□ 0.69
CLIP2-201ENST00000223398 AP1G2O75843 785 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 SKIP12755 728 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 LRRC14Q15048 493 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 FAM83AQ86UY5 434 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GIPC2Q8TF65 315 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 DDX4Q9NQI0 724 aaKnown RBP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 UVRAGQ9P2Y5 699 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 CLCA2Q9UQC9 943 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 H0Y626 953 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 H3BRB1 525 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 SLC26A4O43511 780 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GPD1P21695 349 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 SREBF1P36956 1147 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 P3H1Q32P28 736 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 TUT1Q9H6E5 874 aaKnown RBP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 A0A1B0GTH6 734 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GRID2IPA4D2P6 1211 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GOLGA8RI6L899 631 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 KCNA2P16389 499 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 PDCLQ13371 301 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 PIGHQ14442 188 aaPredicted RBP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 PPP1R36Q96LQ0 422 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 PDCD2LQ9BRP1 358 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 ITM2BQ9Y287 266 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 L3MBTL1Q9Y468 752 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 OGTO15294 1046 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 NPTX2P47972 431 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GAS2O43903 313 aaKnown RBP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 GFAPP14136 432 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 ADORA2AP29274 412 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 FXR1P51114 621 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 CDH18Q13634 790 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 PDE1CQ14123 709 aaPredicted RBP19.38■□□□□ 0.69
CLIP2-201ENST00000223398 DAGLBQ8NCG7 672 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 IPMKQ8NFU5 416 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 ATL2Q8NHH9 583 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 SLC30A1Q9Y6M5 507 aa19.38■□□□□ 0.69
CLIP2-201ENST00000223398 CASTOR2A6NHX0 329 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 CYB561D2O14569 222 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 MAPK13O15264 365 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 TLR2O60603 784 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 ASCC2Q9H1I8 757 aaPredicted RBP19.37■□□□□ 0.69
CLIP2-201ENST00000223398 TXLNGQ9NUQ3 528 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 TRIM10Q9UDY6 481 aa19.37■□□□□ 0.69
CLIP2-201ENST00000223398 BRAFP15056 766 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms