RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 IP6K2Q9UHH9 426 aa14.51□□□□□ -0.09
SIX4-201ENST00000216513 ESYT3A0FGR9 886 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 KITP10721 976 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ZBED6P86452 979 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 IFNL1Q8IU54 200 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ATPAF2Q8N5M1 289 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 TLE6Q9H808 572 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 NFKBIEO00221 500 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 LZTS3O60299 673 aaPredicted RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 PDGFRAP16234 1089 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 NOP14P78316 857 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 MTMR3Q13615 1198 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 OVOS1Q6IE37 1185 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ACOT1Q86TX2 421 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ENOX1Q8TC92 643 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 RSRC1Q96IZ7 334 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 CAPS2Q9BXY5 557 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 MTMR12Q9C0I1 747 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 PDXKO00764 312 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 KRT3P12035 628 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 TUBB2AQ13885 445 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 KCNA10Q16322 511 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 MDH1BQ5I0G3 518 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 CTU1Q7Z7A3 348 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 TUBB2BQ9BVA1 445 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 GPR25O00155 361 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 PEX10O60683 326 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 GPC4O75487 556 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ACRP10323 421 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 MAP3K7CLP57077 242 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 E2F5Q15329 346 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 VPS39Q96JC1 886 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 CCDC195A0A1B0GUA6 201 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 PCDH8O95206 1070 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 FTLP02792 175 aaPredicted RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 ETF1P62495 437 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 MRPS6P82932 125 aaKnown RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 IFT88Q13099 833 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 PCSK7Q16549 785 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 ZNF564Q8TBZ8 553 aaPredicted RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 RPRD1AQ96P16 312 aaPredicted RBP14.5□□□□□ -0.09
SIX4-201ENST00000216513 C11orf49Q9H6J7 331 aa14.5□□□□□ -0.09
SIX4-201ENST00000216513 CCDC78A2IDD5 438 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 OGTO15294 1046 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CUL4AQ13619 759 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 FAM118BQ9BPY3 351 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 KRT82Q9NSB4 513 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CEP72Q9P209 647 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.09
SIX4-201ENST00000216513 TEX33O43247 280 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 ZRANB2O95218 330 aaKnown RBP eCLIP14.49□□□□□ -0.09
SIX4-201ENST00000216513 ASS1P00966 412 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 ZNF697Q5TEC3 545 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 PID1Q7Z2X4 250 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 ATP6V0D2Q8N8Y2 350 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 HIPK4Q8NE63 616 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 SLC30A5Q8TAD4 765 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 HELQQ8TDG4 1101 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 ACSF2Q96CM8 615 aaPredicted RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 PPP1R36Q96LQ0 422 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 NUF2Q9BZD4 464 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 MAP7Q14244 749 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CELF3Q5SZQ8 465 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 KLC3Q6P597 504 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 ZNF513Q8N8E2 541 aaPredicted RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 DDX27Q96GQ7 796 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 RBM41Q96IZ5 413 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 TFR2Q9UP52 801 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CNTNAP2Q9UHC6 1331 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 SLC12A8A0AV02 714 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 MYMKA6NI61 221 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 EEF2KO00418 725 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 TCP1P17987 556 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 SERPINB6P35237 376 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 DHX9Q08211 1270 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 RHOT2Q8IXI1 618 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 NFKBIZQ9BYH8 718 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 PARVAQ9NVD7 372 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CYP39A1Q9NYL5 469 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 F5H5T6 163 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CD52P31358 61 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CRY2Q49AN0 593 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 ITPRIPL1Q6GPH6 555 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 B4GALNT4Q76KP1 1039 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 CFAP61Q8NHU2 1237 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 RUNDC3BQ96NL0 473 aa14.49□□□□□ -0.09
SIX4-201ENST00000216513 DDX20Q9UHI6 824 aaKnown RBP14.49□□□□□ -0.09
SIX4-201ENST00000216513 E2F8A0AVK6 867 aa14.48□□□□□ -0.09
SIX4-201ENST00000216513 YBX3P16989 372 aaKnown RBP eCLIP14.48□□□□□ -0.09
SIX4-201ENST00000216513 GUF1Q8N442 669 aaKnown RBP14.48□□□□□ -0.09
SIX4-201ENST00000216513 CORO1BQ9BR76 489 aa14.48□□□□□ -0.09
SIX4-201ENST00000216513 POLR3CQ9BUI4 534 aaPredicted RBP14.48□□□□□ -0.09
SIX4-201ENST00000216513 STN1Q9H668 368 aaKnown RBP14.48□□□□□ -0.09
SIX4-201ENST00000216513 LRRC53A6NM62 1247 aa14.48□□□□□ -0.09
SIX4-201ENST00000216513 RAP1GAPP47736 663 aa14.48□□□□□ -0.09
SIX4-201ENST00000216513 NFU1Q9UMS0 254 aa14.48□□□□□ -0.09
SIX4-201ENST00000216513 MRPS23Q9Y3D9 190 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms