RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 INPP4AQ96PE3 977 aaPredicted RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 EIF2AK1Q9BQI3 630 aaKnown RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 PRKAG2Q9UGJ0 569 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 BTAF1O14981 1849 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 RIC1Q4ADV7 1423 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 SLC16A4O15374 487 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 KRT38O76015 456 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 TAL1P17542 331 aaPredicted RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 EPHB2P29323 1055 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 RFC5P40937 340 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 AP3B2Q13367 1082 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 CYTH1Q15438 398 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 RINT1Q6NUQ1 792 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 DCLK2Q8N568 766 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 NXF1Q9UBU9 619 aaKnown RBP12.16□□□□□ -0.46
DNMT3B-201ENST00000201963 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 CYP11B2P19099 503 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 CACNA2D1P54289 1103 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 BACE1P56817 501 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 MIIPQ5JXC2 388 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 SNX30Q5VWJ9 437 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 RAPH1Q70E73 1250 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 MTDHQ86UE4 582 aaKnown RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PARD3BQ8TEW8 1205 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ZC3H15Q8WU90 426 aaKnown RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 A1CFQ9NQ94 594 aaKnown RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PDP2Q9P2J9 529 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 RIPK2O43353 540 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ATP9AO75110 1047 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 CBX6O95503 412 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 RPL21P46778 160 aaKnown RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 EPC2Q52LR7 807 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ZNF662Q6ZS27 426 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 GPRC5AQ8NFJ5 357 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 MAGEB18Q96M61 343 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 AIPL1Q9NZN9 384 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PSMC3IPQ9P2W1 217 aaPredicted RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PCSK1NQ9UHG2 260 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 TRIM33Q9UPN9 1127 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 DLG5Q8TDM6 1919 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 SRRM3A6NNA2 597 aaPredicted RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 AOC2O75106 756 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ZBED1O96006 694 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ATP6V1B1P15313 513 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 KRT4P19013 534 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PSMA2P25787 234 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 ZCWPW2Q504Y3 356 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 TAF1BQ53T94 588 aaPredicted RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 GLIS3Q8NEA6 775 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 PRDM5Q9NQX1 630 aaPredicted RBP12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 UVRAGQ9P2Y5 699 aa12.15□□□□□ -0.46
DNMT3B-201ENST00000201963 SLC16A3O15427 465 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 KLRC4O43908 158 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 CALB2P22676 271 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 EEF1B2P24534 225 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 GARSP41250 739 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 XRCC4Q13426 336 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 KRT39Q6A163 491 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 CCT6BQ92526 530 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 HSPH1Q92598 858 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 AGBL1Q96MI9 1066 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 TEX13BQ9BXU2 312 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 TCRBV5S4A2TA0A5A2 114 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 AKAP3O75969 853 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 PGK2P07205 417 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 GSTA2P09210 222 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 RFX1P22670 979 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 FLT3P36888 993 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 CNGA3Q16281 694 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 ATP8B4Q8TF62 1192 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 EFHD1Q9BUP0 239 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 FEM1BQ9UK73 627 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 C4BP0C0L5 1744 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 GRIN2DO15399 1336 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 EYA4O95677 639 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 HSPA4LO95757 839 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 FNTAP49354 379 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 POLGP54098 1239 aaPredicted RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 RHBDL3P58872 404 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 YWHAEP62258 255 aaKnown RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 SYDE1Q6ZW31 735 aaPredicted RBP12.14□□□□□ -0.47
DNMT3B-201ENST00000201963 NT5DC3Q86UY8 548 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms