RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 PRDM16Q9HAZ2 1276 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 ARL8BQ9NVJ2 186 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 ARHGEF38Q9NXL2 777 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 SUN2Q9UH99 717 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 PTPN22Q9Y2R2 807 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 ACTL7BQ9Y614 415 aa15.71■□□□□ 0.11
TMEM38A-201ENST00000187762 PLSCR1O15162 318 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 MAGEB3O15480 346 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 TCEA3O75764 348 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 HARSP12081 509 aaKnown RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 AMPD1P23109 780 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 YY1P25490 414 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 CDC16Q13042 620 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 CALCOCO2Q13137 446 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 ITGA9Q13797 1035 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 CTTNQ14247 550 aaKnown RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 DCAF17Q5H9S7 520 aaPredicted RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 SYDE2Q5VT97 1194 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 ZC3H3Q8IXZ2 948 aaKnown RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 ANKRD35Q8N283 1001 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 RFFLQ8WZ73 363 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 CCDC17Q96LX7 622 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 BRD8Q9H0E9 1235 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 IKZF4Q9H2S9 585 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 UBN1Q9NPG3 1134 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 FAM198AQ9UFP1 575 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 IGSF9BQ9UPX0 1349 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 TTC4O95801 387 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 ANPEPP15144 967 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 MLH1P40692 756 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 KCNA1Q09470 495 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 SH3D19Q5HYK7 790 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 TMEM63BQ5T3F8 832 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 MEX3CQ5U5Q3 659 aaKnown RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 SLFN12Q8IYM2 578 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 DCAF4Q8WV16 495 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 NDUFA13Q9P0J0 144 aa15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 AJAP1Q9UKB5 411 aaPredicted RBP15.7■□□□□ 0.1
TMEM38A-201ENST00000187762 A8MXQ7 604 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 F5H6K3 240 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CDK4P11802 303 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 IDO1P14902 403 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 ALOX15P16050 662 aaPredicted RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CHKAP35790 457 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CYLC2Q14093 348 aaPredicted RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 KYNUQ16719 465 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 EDRF1Q3B7T1 1238 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CCDC105Q8IYK2 499 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SPIRE2Q8WWL2 714 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 DGCR14Q96DF8 476 aaKnown RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 POLR3CQ9BUI4 534 aaPredicted RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 EBF3Q9H4W6 596 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CYLDQ9NQC7 956 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 DNM3Q9UQ16 869 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SYNGAP1Q96PV0 1343 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SPAG7O75391 227 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 AKAP3O75969 853 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 POLD1P28340 1107 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 CASP4P49662 377 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 EMP3P54852 163 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 JAG1P78504 1218 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 KNOP1Q1ED39 458 aaKnown RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 B3GNT6Q6ZMB0 384 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 ARL10Q8N8L6 244 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 RSPH1Q8WYR4 309 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 SIKE1Q9BRV8 207 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 AMNQ9BXJ7 453 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 BHMT2Q9H2M3 363 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 KIF13BQ9NQT8 1826 aa15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 COL11A2P13942 1736 aaPredicted RBP15.69■□□□□ 0.1
TMEM38A-201ENST00000187762 A0A1W2PRG0 241 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 RASA4BC9J798 803 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 CLIC2O15247 247 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 RASA4O43374 803 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 CDH16O75309 829 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 PIM1P11309 404 aaPredicted RBP15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 AP3B2Q13367 1082 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 SPARCL1Q14515 664 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 PDK4Q16654 411 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 KBTBD12Q3ZCT8 623 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 RINLQ6ZS11 566 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 TSPAN18Q96SJ8 248 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 GRID1Q9ULK0 1009 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 FAM170AA1A519 330 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 CFAP69A5D8W1 941 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 TP73O15350 636 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 MSH4O15457 936 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 ZNF862O60290 1169 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 HAUS5O94927 633 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 NDUFB10O96000 172 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 RPA1P27694 616 aa15.68■□□□□ 0.1
TMEM38A-201ENST00000187762 COILP38432 576 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms