RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MCRS1Q96EZ8 462 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 KXD1Q9BQD3 176 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 CORO1BQ9BR76 489 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 FOXQ1Q9C009 403 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 TRPV4Q9HBA0 871 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 CEP72Q9P209 647 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 CACNA1AO00555 2505 aa17.27■□□□□ 0.36
ERCC1-201ENST00000013807 TICRRQ7Z2Z1 1910 aa17.27■□□□□ 0.35
ERCC1-201ENST00000013807 NUP210Q8TEM1 1887 aaPredicted RBP17.27■□□□□ 0.35
ERCC1-201ENST00000013807 SHISA7A6NL88 538 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 MOSPD3O75425 235 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 CEBPBP17676 345 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 TYMPP19971 482 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 CCR2P41597 374 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 GPR17Q13304 367 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 MCM6Q14566 821 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 KARSQ15046 597 aaKnown RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF528Q3MIS6 628 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 TANGO2Q6ICL3 276 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 RNF19BQ6ZMZ0 732 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 MAML2Q8IZL2 1156 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 DNASE1L2Q92874 299 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 TCEAL4Q96EI5 215 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 BICD1Q96G01 975 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF512Q96ME7 567 aaPredicted RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 ASB16Q96NS5 453 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 LRRC3Q9BY71 257 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
ERCC1-201ENST00000013807 HSFX1Q9UBD0 423 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 DERAQ9Y315 318 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
ERCC1-201ENST00000013807 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 PIRO00625 290 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 FAM13AO94988 1023 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 VNN2O95498 520 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 SP9P0CG40 484 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 RPS9P46781 194 aaKnown RBP17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ARPP19P56211 112 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 LILRA4P59901 499 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 SPAG1Q07617 926 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 MYBPC2Q14324 1141 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 PTPAQ15257 358 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 FAM78AQ5JUQ0 283 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ZBTB41Q5SVQ8 909 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 CYP4A22Q5TCH4 519 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 IQCEQ6IPM2 695 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ADSSL1Q8N142 457 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ELMOD1Q8N336 334 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 GPR88Q9GZN0 384 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ASB7Q9H672 318 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ZFP14Q9HCL3 533 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 LTB4R2Q9NPC1 389 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 FBXO4Q9UKT5 387 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 MTF2Q9Y483 593 aaPredicted RBP17.25■□□□□ 0.35
ERCC1-201ENST00000013807 MORC2Q9Y6X9 1032 aaPredicted RBP17.25■□□□□ 0.35
ERCC1-201ENST00000013807 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
ERCC1-201ENST00000013807 ANO9A1A5B4 782 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 K7ENM7 598 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 LMNAP02545 664 aaKnown RBP17.24■□□□□ 0.35
ERCC1-201ENST00000013807 CYP11A1P05108 521 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 PDCP20941 246 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 MATR3P43243 847 aaKnown RBP eCLIP17.24■□□□□ 0.35
ERCC1-201ENST00000013807 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
ERCC1-201ENST00000013807 TWF1Q12792 350 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 FZD5Q13467 585 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 SPECC1Q5M775 1068 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 ZC3H14Q6PJT7 736 aaKnown RBP17.24■□□□□ 0.35
ERCC1-201ENST00000013807 MAMSTRQ6ZN01 415 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 PDZD4Q76G19 769 aaPredicted RBP17.24■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF687Q8N1G0 1237 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 TMEM130Q8N3G9 435 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 MSTO1Q9BUK6 570 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 BCO2Q9BYV7 579 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 C2CD2Q9Y426 696 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 GPR179Q6PRD1 2367 aa17.24■□□□□ 0.35
ERCC1-201ENST00000013807 FAM170BA6NMN3 283 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 NRG2O14511 850 aaPredicted RBP17.23■□□□□ 0.35
ERCC1-201ENST00000013807 LRRN2O75325 713 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 PPP1R37O75864 691 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 CPB1P15086 417 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 C9orf57Q5W0N0 161 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 CENPPQ6IPU0 288 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF852Q6ZMS4 543 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 NELL1Q92832 810 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 SMARCD2Q92925 531 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 HVCN1Q96D96 273 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
ERCC1-201ENST00000013807 SRPRBQ9Y5M8 271 aaKnown RBP17.23■□□□□ 0.35
ERCC1-201ENST00000013807 NCAM2O15394 837 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 TBCAO75347 108 aaKnown RBP17.22■□□□□ 0.35
ERCC1-201ENST00000013807 PSMC3P17980 439 aa17.22■□□□□ 0.35
ERCC1-201ENST00000013807 NMT1P30419 496 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms