RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 METTL5Q9NRN9 209 aaKnown RBP12.79□□□□□ -0.36
TSPAN9-201ENST00000011898 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 MSH4O15457 936 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CLDN3O15551 220 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ATP9AO75110 1047 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 AKAP3O75969 853 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 UPP2O95045 317 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TRIP10Q15642 601 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 IL17AQ16552 155 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KLC3Q6P597 504 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TRMT10CQ7L0Y3 403 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 THNSL1Q8IYQ7 743 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KCTD6Q8NC69 237 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TMEM35BQ8NCS4 154 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KIAA1586Q9HCI6 787 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ZNF70Q9UC06 446 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CORO1CQ9ULV4 474 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 WDR46O15213 610 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TARSP26639 723 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 FUT2Q10981 343 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 APOBEC3HQ6NTF7 200 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KDM4CQ9H3R0 1056 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 PDE2AO00408 941 aaPredicted RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 SLC26A4O43511 780 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 LDHAP00338 332 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 YWHABP31946 246 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 TRPC1P48995 793 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ADARP55265 1226 aaKnown RBP12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CAV1Q03135 178 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KRT17Q04695 432 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 SPP2Q13103 211 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CNGA3Q16281 694 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 RUSC1Q9BVN2 902 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 ZWILCHQ9H900 591 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 CHD4Q14839 1912 aa12.78□□□□□ -0.36
TSPAN9-201ENST00000011898 KLRC4O43908 158 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 GGPS1O95749 300 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 PLS3P13797 630 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 COMTP21964 271 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 GSTT1P30711 240 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 SFNP31947 248 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 GSCP56915 257 aaPredicted RBP12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 GIT2Q14161 759 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 DARS2Q6PI48 645 aaKnown RBP12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 ZNF571Q7Z3V5 609 aaPredicted RBP12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 TRIM50Q86XT4 487 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 RBM41Q96IZ5 413 aaKnown RBP12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 KLHL25Q9H0H3 589 aa12.77□□□□□ -0.36
TSPAN9-201ENST00000011898 GOLGA8MH3BSY2 632 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 FZD9O00144 591 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 RHBDL3P58872 404 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 MPP4Q96JB8 637 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 RNF146Q9NTX7 359 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 MLH1P40692 756 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 PDE1BQ01064 536 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 KDSRQ06136 332 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 SLC29A2Q14542 456 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 APOBEC3FQ8IUX4 373 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 PRMT6Q96LA8 375 aaPredicted RBP12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 EFHD1Q9BUP0 239 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 AGPAT3Q9NRZ7 376 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 PCDHA10Q9Y5I2 948 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 DOCK2Q92608 1830 aa12.77□□□□□ -0.37
TSPAN9-201ENST00000011898 FOXN3O00409 490 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 PHF2O75151 1096 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 TBL3Q12788 808 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 THAP2Q9H0W7 228 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 HAO1Q9UJM8 370 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 EIF3DO15371 548 aaKnown RBP eCLIP12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 CCDC22O60826 627 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 DAB1O75553 588 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 GSTA1P08263 222 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 PSMA2P25787 234 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 GNA15P30679 374 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 GJA8P48165 433 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 ALDH5A1P51649 535 aaPredicted RBP12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 PSMC6P62333 389 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 ASPHQ12797 758 aa12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 NSUN6Q8TEA1 469 aaKnown RBP12.76□□□□□ -0.37
TSPAN9-201ENST00000011898 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms