RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 GOLGA8MH3BSY2 632 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 AP1G2O75843 785 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 GRIK5Q16478 980 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 DBN1Q16643 649 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 SEZ6Q53EL9 994 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC35G2Q8TBE7 412 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 APBA2Q99767 749 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 MTMR12Q9C0I1 747 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 TRPV2Q9Y5S1 764 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 COPEO14579 308 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 SLC11A2P49281 568 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 CCDC137Q6PK04 289 aaKnown RBP10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 ADGRF2Q8IZF7 708 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 RAB42Q8N4Z0 105 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 RAPGEF5Q92565 580 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 SNF8Q96H20 258 aa10.9□□□□□ -0.66
NIPAL3-201ENST00000003912 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 VDRP11473 427 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 SATB1Q01826 763 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 YWHAHQ04917 246 aaPredicted RBP10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 GTF2H3Q13889 308 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 NAB2Q15742 525 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 TMC7Q7Z402 723 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 CBWD2Q8IUF1 395 aa10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 SARS2Q9NP81 518 aaKnown RBP10.9□□□□□ -0.67
NIPAL3-201ENST00000003912 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 NCK2O43639 380 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CYP3A4P08684 503 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 BRD2P25440 801 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 MYBPC2Q14324 1141 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 NFE2Q16621 373 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 KBTBD4Q9NVX7 518 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 HACD3Q9P035 362 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CFAP69A5D8W1 941 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CASP2P42575 452 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 EPHB3P54753 998 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 DHX34Q14147 1143 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 NR1I3Q14994 352 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 P3H1Q32P28 736 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 PPHLN1Q8NEY8 458 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 PABPC5Q96DU9 382 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 LRGUKQ96M69 825 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 PARD6BQ9BYG5 372 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 WTIPA6NIX2 430 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 F5H423 210 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 GRAP2O75791 330 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 TAL1P17542 331 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 BTG3Q14201 252 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 SLC27A1Q6PCB7 646 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 GPR142Q7Z601 462 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 SYN2Q92777 582 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 DRC3Q9H069 523 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 FAM86B1E9PN63 330 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 FAM86B2P0C5J1 330 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 GHRP10912 638 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 TTC19Q6DKK2 380 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 OTOP1Q7RTM1 612 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CNPY4Q8N129 248 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 ATL2Q8NHH9 583 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 FBXO32Q969P5 355 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 PBXIP1Q96AQ6 731 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 TSSK1BQ9BXA7 367 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CYP3A43Q9HB55 503 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 NDFIP2Q9NV92 336 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 CYP39A1Q9NYL5 469 aa10.89□□□□□ -0.67
NIPAL3-201ENST00000003912 UBA6A0AVT1 1052 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 KCNN4O15554 427 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TTC4O95801 387 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 LGALS2P05162 132 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 PDK1Q15118 436 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TSNAXIP1Q2TAA8 658 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SYDE1Q6ZW31 735 aaPredicted RBP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 RASSF3Q86WH2 238 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 C1orf54Q8WWF1 131 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SPIRE2Q8WWL2 714 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SH3KBP1Q96B97 665 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 OLFML3Q9NRN5 406 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 TRPM5Q9NZQ8 1165 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 RARRES1P49788 294 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ARHGEF7Q14155 803 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 AMHR2Q16671 573 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 ATP11CQ8NB49 1132 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 CDC26Q8NHZ8 85 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 KRT35Q92764 455 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 SDCCAG3Q96C92 435 aa10.88□□□□□ -0.67
NIPAL3-201ENST00000003912 CBWD1Q9BRT8 395 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms