RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Map4k3Q99JP0 894 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Trap1Q9CQN1 706 aaKnown RBP15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rexo2Q9D8S4 237 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 MesdQ9ERE7 224 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 PigoQ9JJI6 1093 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 PfkpQ9WUA3 784 aaKnown RBP15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Stat2Q9WVL2 923 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gucy2dA0A0U1RPR8 1117 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Slc6a21A0A1B0GSD2 748 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Slc16a6B1AT66 607 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Cpsf2O35218 782 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Stk10O55098 966 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ranbp1P34022 203 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Dlg3P70175 849 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tspyl3Q3UYP3 334 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Mfhas1Q3V1N1 1048 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zbtb8osQ505B7 168 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Myl6Q60605 151 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Avpr1aQ62463 423 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 RetsatQ64FW2 609 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 GmipQ6PGG2 971 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 AdalQ80SY6 360 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Efl1Q8C0D5 1127 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tbx22Q8K402 517 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 SfpqQ8VIJ6 699 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ankrd54Q91WK7 299 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Mettl13Q91YR5 698 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Fam133bQ9CVI2 245 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Coro7Q9D2V7 922 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Stk4Q9JI11 487 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ankrd2Q9WV06 328 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Usp34Q6ZQ93 3582 aa15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 SktA2AQ25 1946 aaKnown RBP15.22■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gm28510A0A087WP28 240 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gm8909G3UXE9 396 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 ChkbO55229 394 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Hoxd10P28359 340 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 GscQ02591 256 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Spink5Q148R4 1017 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tp53i13Q5F267 385 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Klhl17Q6TDP3 640 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Znf12Q7TSI0 686 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Prdm4Q80V63 803 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Agbl2Q8CDK2 862 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Kct2Q8K201 259 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Sbk1Q8QZX0 417 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Dr1Q91WV0 176 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Micu3Q9CTY5 523 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zfyve19Q9DAZ9 389 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Pacsin2Q9WVE8 486 aaKnown RBP15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ppp2r3dQ9Z176 491 aa15.21■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Scn1aA2APX8 2009 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Spata31d1dE9Q5W2 1247 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Ass1P16460 412 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Adamts19P59509 1210 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Sh3bp2Q06649 559 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Tatdn3Q3U1C6 294 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Cyp3a16Q64481 504 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Ints2Q80UK8 1198 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Q8BGC1 442 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Fam160b1Q8CDM8 764 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Cog3Q8CI04 820 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Fbxo33Q8VE08 562 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Senp2Q91ZX6 588 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gimap3Q99MI6 301 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 MefvQ9JJ26 767 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Trpc3Q9QZC1 836 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Dnajc12Q9R022 198 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Mta2Q9R190 668 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Cd97Q9Z0M6 818 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gm28036V9GXJ1 658 aa15.21■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Myo16Q5DU14 1919 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gm4846B2RWH8 538 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Tatdn2B7ZNL9 783 aaKnown RBP15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gm4297D3YWB7 211 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Vmn2r17E9PYF5 849 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gm3127E9Q9P5 263 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Gm3453K7N724 263 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Xrcc5P27641 732 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Cd86P42082 309 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Sox13Q04891 613 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 SPINDOCQ05AH6 381 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Trip13Q3UA06 432 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Rmdn3Q3UJU9 470 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Fam92bQ3V2J0 292 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Q8BGD0 127 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Fam177a1Q8BR63 207 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Kcnv1Q8BZN2 503 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 CarfQ8VHI4 689 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 ArpinQ9D0A3 226 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 3830403N18RikQ9D6C3 208 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Chst7Q9EP78 484 aa15.2■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Fbf1A2A870 1173 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Dpy19l4A2AJQ3 722 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Vmn2r55G3UWZ4 781 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 4933406M09RikG3XA12 479 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Vmn2r53L7N473 806 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Tbxas1P36423 533 aa15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Usp10P52479 792 aaKnown RBP15.19■□□□□ 0.02
Ssr1-204ENSMUST00000225319 Upf3bQ3ULL6 472 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 144 ms