RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Lrfn2Q80TG9 788 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 BfarQ8R079 450 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Tlr9Q9EQU3 1032 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Cyp19a1P28649 503 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Hnrnph2P70333 449 aaKnown RBP17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Nr1h4Q60641 488 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Slc6a15Q8BG16 729 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Enoph1Q8BGB7 257 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Mtss1Q8R1S4 759 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ciapin1Q8WTY4 309 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 TrabdQ99JY4 376 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ubxn2aQ99KJ0 258 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Clca1Q9D7Z6 913 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Atp6v0a1Q9Z1G4 839 aaKnown RBP17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 CemipQ8BI06 1361 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Gbp11A9YVJ5 442 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Gm10436L7N1Y3 520 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Q14AM7 275 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Klra7Q60654 280 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Nudt16Q6P3D0 195 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Armc12Q80X86 340 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ece2Q80Z60 881 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Reep2Q8VCD6 254 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 4930469K13RikA0A286YDB2 92 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Gcnt1Q09324 428 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Rasip1Q3U0S6 961 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Krt73Q6NXH9 539 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Rundc3bQ6PDC0 408 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 HpdlQ8K248 371 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Cmtr1Q9DBC3 837 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 M1apQ9Z0E1 529 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ace3D0G895 737 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Gm5152L7N200 190 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 CflarO35732 481 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 PtpreP49446 699 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Capn13Q3UW68 665 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ankrd42Q3V096 527 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Scd4Q6T707 353 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Slc9c1Q6UJY2 1175 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ssxb10Q6XAR7 170 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ssxb5Q6XAS2 159 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Scfd2Q8BTY8 684 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Appl1Q8K3H0 707 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Lman1lQ8VCD3 505 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Pdk2Q9JK42 407 aa17.96■□□□□ 0.47
Ptpre-207ENSMUST00000211140 Ppef2O35385 757 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Eif3dO70194 548 aaKnown RBP17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Pou4f1P17208 421 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Otub1Q7TQI3 271 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Map7d3A2AEY4 876 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Cylc2B1AWN8 422 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 MycP01108 439 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Tshz2Q68FE9 1030 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Dctn3Q9Z0Y1 186 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Patl2A2ARM1 529 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Got1P05201 413 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 CblP22682 913 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Ica1lQ3TY65 431 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Spout1Q3UHX9 385 aaKnown RBP17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Rbl2Q64700 1135 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Smtnl2Q8CI12 456 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Q9D937 123 aaKnown RBP17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Znf654Q9DAU9 571 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Gm5861F6VCN9 180 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 4933402N22RikF7D1B3 190 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 TxnP10639 105 aaKnown RBP17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 RalaP63321 206 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Runx1t1Q61909 577 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Vmn2r43Q80Z08 845 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Cyp4f14Q9EP75 524 aa17.95■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Sat1P48026 171 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Znf618Q80YY7 953 aaKnown RBP17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Abraxas1Q8BPZ8 407 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 RbakQ8BQC8 711 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Foxo4Q9WVH3 505 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 CenpaO35216 134 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 CcnoP0C242 352 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Csn1s1P19228 313 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 PolgP54099 1218 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Cadm1Q8R5M8 456 aaKnown RBP17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Pdxdc1Q99K01 787 aaKnown RBP17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Phtf1Q9QZ09 761 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Deaf1Q9Z1T5 566 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 CpdO89001 1377 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Prl2c3P04768 224 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Osbpl6Q8BXR9 959 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 NclnQ8VCM8 563 aaKnown RBP17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Caap1Q8VDY9 356 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Trip4Q9QXN3 581 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Dnajc7Q9QYI3 494 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Scgb2b11A0A087WR49 112 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Gm13023A2A8N2 498 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 H2afxP27661 143 aaKnown RBP17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Fam120bQ6RI63 786 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Ttc39bQ8BYY4 617 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Josd2Q9CR30 188 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Wdr64Q9D565 1086 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Mad2l2Q9D752 211 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Lrrc46Q9DAP0 323 aa17.94■□□□□ 0.46
Ptpre-207ENSMUST00000211140 Rps6P62754 249 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms