RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Ppp1r3aQ99MR9 1089 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Susd3Q9D176 269 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Sv2aQ9JIS5 742 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Trpc3Q9QZC1 836 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Smarcb1Q9Z0H3 385 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 TrioQ0KL02 3102 aa13.13□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 4932429P05RikA2ADI4 785 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Rdh7O88451 316 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Scrg1O88745 98 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Hk1P17710 974 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Dbx1P52950 335 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Hmgb1P63158 215 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Hoxd13P70217 339 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Znf827Q505G8 1078 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Fbxw11Q5SRY7 542 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Slc20a1Q61609 681 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Krt31Q61765 416 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Cfap97Q6ZPR1 541 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Arhgap26Q6ZQ82 814 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Tas2r125Q7M710 311 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Trnau1apQ80VC6 287 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Aste1Q8BIR2 672 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Anks1bQ8BIZ1 1259 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Iqcb1Q8BP00 598 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gpr61Q8C010 449 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Traf3ip3Q8C0G2 513 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Fam161bQ8CB59 589 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 GarsQ9CZD3 729 aaKnown RBP13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Ephx1Q9D379 455 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 March8Q9DBD2 286 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 H2-OaQ9QWV1 250 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Dctpp1Q9QY93 170 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Col6a3E9PWQ3 3284 aa13.12□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Vwa8Q8CC88 1905 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gm281D3Z1Y0 860 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gm5934D3Z4U6 212 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gm5624F6ZZG8 207 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Calhm3J3QMI4 347 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Slc3a2P10852 526 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gas2P11862 314 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Ppp3caP63328 521 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Prdx5P99029 210 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 4933416C03RikQ3V063 378 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Znrf3Q5SSZ7 913 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 EfsQ64355 560 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Tbc1d12Q6A039 696 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Adam6bQ6IMH7 756 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Krba1Q6NXZ1 1043 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 PdgfrlQ6PE55 375 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 DekQ7TNV0 380 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 B3glctQ8BHT6 489 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Olfml3Q8BK62 406 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Pyhin1Q8BV49 420 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Tmem63cQ8CBX0 802 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Mtnr1bQ8CIQ6 364 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gga1Q8R0H9 635 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Luzp1Q8R4U7 1068 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Olfr385Q8VGT1 312 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 SrrtQ99MR6 875 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Ccdc43Q9CR29 222 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Filip1Q9CS72 1211 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Trmt10bQ9D075 318 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gstt4Q9D4P7 240 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Rfx5Q9JL61 658 aa13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Knop1Q9Z2Q2 478 aaKnown RBP13.11□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Odf2A3KGV1 830 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 4930444G20RikD3Z741 495 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 XntrpcF8VQM8 1264 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 4933406M09RikG3XA12 479 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gm3642K7N6V4 267 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 GlulP15105 373 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Tmprss15P97435 1069 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Sox8Q04886 464 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Myl6Q60605 151 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Pwwp2aQ69Z61 730 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 MyorgQ69ZQ1 716 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Paqr9Q6TCG2 375 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Enox1Q8BHR2 643 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Zbtb6Q8K088 423 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Fam129bQ8R1F1 749 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Znf830Q8R1N0 363 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Pcdha9Q91Y11 979 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 CmasQ99KK2 432 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Mrpl9Q99N94 265 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Rpl17Q9CPR4 184 aaKnown RBP13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Ankrd1Q9CR42 319 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Rnf6Q9DBU5 667 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Erap1Q9EQH2 930 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Oxct2bQ9ESL0 520 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Oxct2aQ9JJN4 520 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Frem3Q5H8B9 2123 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Arhgef10Q8C033 1345 aa13.1□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Myo15bI7HPW8 3033 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Znf568E9PYI1 671 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Gm8298J3QPI0 401 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Stx1aO35526 288 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Cyp2b9P12790 491 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Tnnc1P19123 161 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 Kif4P33174 1231 aa13.09□□□□□ -0.31
Ccdc28a-203ENSMUST00000173243 CkbQ04447 381 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms