RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Hmgxb3G3X9M3 1254 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Sec22bO08547 215 aaKnown RBP13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Arhgap44Q5SSM3 814 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Tmc4Q7TQ65 694 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Fam118bQ8C569 351 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Homer3Q99JP6 356 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Rnaseh2aQ9CWY8 301 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Clca1Q9D7Z6 913 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 PolgP54099 1218 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 SnrpfP62307 86 aaKnown RBP13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Bcap29Q61334 240 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Pdk1Q8BFP9 434 aaKnown RBP13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Stk33Q924X7 491 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Plagl2Q925T4 496 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 LactbQ9EP89 551 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Aff4Q9ESC8 1160 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Mindy4b-psA0A1W2P7H6 457 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Lonrf1D3YY23 762 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 BhmtO35490 407 aaKnown RBP13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Hoxb8P09632 243 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Dab1P97318 588 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Thnsl1Q8BH55 747 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Elmo2Q8BHL5 732 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Aldh5a1Q8BWF0 523 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Pcdha9Q91Y11 979 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Alg1Q921Q3 482 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Emc2Q9CRD2 297 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Cmtr1Q9DBC3 837 aa13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Fxr2Q9WVR4 673 aaKnown RBP13.41□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gm3173A6NAS3 172 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gm3020E9Q3J7 150 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gm2897K7N6T7 172 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Men1O88559 611 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Rbm46P86049 533 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Trim43bP86448 445 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Rc3h1Q4VGL6 1130 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Polr2eQ80UW8 210 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 NcaphQ8C156 731 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gm3411Q8C7R2 150 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Grk2Q99MK8 689 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Txndc9Q9CQ79 226 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Akap1O08715 857 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Usp13Q5BKP2 858 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 SnphQ80U23 495 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Snrnp27Q8K194 155 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Golph3Q9CRA5 298 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 TriqkB2B9E1 86 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Serpinh1P19324 417 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Atp6v1b2P62814 511 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Cct7P80313 544 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Serpina1eQ00898 413 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Nr1h4Q60641 488 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gpr101Q80T62 511 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Nim1kQ8BHI9 436 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Vcpip1Q8CDG3 1220 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Psmd12Q9D8W5 456 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 ParvbQ9ES46 365 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Scgb2b20Q9JI02 112 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Slc26a4Q9R155 780 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Gemin5Q8BX17 1502 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Zfp984A2A7A2 547 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Kcna3P16390 528 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Sco1Q5SUC9 284 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 CtifQ6PEE2 600 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Prpf4Q9DAW6 521 aaKnown RBP13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Ass1P16460 412 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Tcf12Q61286 706 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Xlr3cQ61806 226 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Smarca1Q6PGB8 1046 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Pip4k2cQ91XU3 421 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 CinpQ9D0V8 212 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Krtap5-3Q9D226 196 aa13.4□□□□□ -0.26
Gm28043-201ENSMUST00000130871 Fam205aA2APU8 1308 aa13.4□□□□□ -0.27
Gm28043-201ENSMUST00000130871 SynrgQ5SV85 1306 aa13.4□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Ppef2O35385 757 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Pak5Q8C015 719 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Pop1Q8K205 1045 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Sh2d4aQ9D7V1 421 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Lrrc46Q9DAP0 323 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Spag6Q9JLI7 507 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Mbd5B1AYB6 1498 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Cyp2c69E9PXC3 491 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 PrkceP16054 737 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Fkbp1aP26883 108 aaKnown RBP13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Slc11a2P49282 568 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Cyp2c40P56657 491 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Lzts1P60853 599 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Ano5Q75UR0 904 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Prr33Q8C494 260 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Tesk2Q8VCT9 570 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Gm29554A0A087WNW4 188 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 4930469K13RikA0A286YDB2 92 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Oog1E9Q5G7 496 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Csn1s1P19228 313 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Ptprn2P80560 1001 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Atp4aQ64436 1033 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Wnk4Q80UE6 1222 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Wrap53Q8VC51 532 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 IrgqQ8VIM9 583 aa13.39□□□□□ -0.27
Gm28043-201ENSMUST00000130871 Fam49bQ921M7 324 aa13.39□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms