RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Foxo6Q70KY4 559 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Wnk4Q80UE6 1222 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Tmtc4Q8BG19 741 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 MyripQ8K3I4 856 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Prpsap1Q9D0M1 356 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Msh3P13705 1091 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Sstr3P30935 428 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Ndufs6P52503 116 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Atp13a5Q3TYU2 1216 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 FaxcQ3UMF9 409 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Thrap3Q569Z6 951 aaKnown RBP16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 CpQ61147 1061 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 FntaQ61239 377 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Zdhhc14Q8BQQ1 489 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Smtnl2Q8CI12 456 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 OafQ8QZR4 282 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 NonoQ99K48 473 aaKnown RBP16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Cdk5rap3Q99LM2 503 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Wars2Q9CYK1 360 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Ddx56Q9D0R4 546 aaKnown RBP16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Nsmce1Q9D720 266 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Dbn1Q9QXS6 706 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Stx1bP61264 288 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Rad54lP70270 747 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Ces5aQ6AW46 575 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Pcdha10Q91Y20 946 aa16.35■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Klhl41A2AUC9 606 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Olfr1354E9Q5G9 310 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Pkn2Q8BWW9 983 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Fam205a1D3YZF6 1314 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Trim5E9PV98 497 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Serpinh1P19324 417 aaKnown RBP16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Fam47cQ14BE7 430 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Agap2Q3UHD9 1186 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Atl2Q6PA06 583 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Znf654Q9DAU9 571 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Pard6bQ9JK83 371 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Gm6370A0A0G2JGX9 315 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Gm6309L7N481 315 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 PRAG1Q571I4 1179 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Ppp1r13lQ5I1X5 824 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Sema5aQ62217 1077 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Pcdha9Q91Y11 979 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Fuca2Q99KR8 461 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Sv2aQ9JIS5 742 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Gabbr1Q9WV18 960 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Nfatc2ipO09130 412 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Gnl1P36916 607 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Gsdmc4Q3TR54 480 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Apol7eQ3UZ24 369 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Trim38Q5SZ99 471 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Dclk2Q6PGN3 756 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Kbtbd3Q8BHI4 607 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 EtnpplQ8BWU8 499 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Aipl1Q924K1 328 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Slc12a6Q924N4 1150 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 March8Q9DBD2 286 aa16.34■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Wdr72D3YYM4 1114 aa16.33■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Aff1O88573 1216 aa16.33■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Hmgcs2P54869 508 aa16.33■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Hnrnph2P70333 449 aaKnown RBP16.33■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 Rnf10Q3UIW5 804 aa16.33■□□□□ 0.21
Ccdc88b-201ENSMUST00000113440 GfapP03995 430 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Hoxa11P31311 313 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Olfm3P63056 478 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tmem120bQ3TA38 339 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rusc1Q8BG26 893 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ttc7aQ8BGB2 858 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ccdc40Q8BI79 1192 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Eif2b5Q8CHW4 717 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Pnpt1Q8K1R3 783 aaKnown RBP16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Twf1Q91YR1 350 aaKnown RBP16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Fgd4Q91ZT5 766 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Slc22a3Q9WTW5 551 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Arih1Q9Z1K5 555 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Krt16Q9Z2K1 469 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gm3460E9QAI8 215 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Magea8O89012 320 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ccnd2P30280 289 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Cdc25cP48967 447 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Eif3eP60229 445 aaKnown RBP16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Krt42Q6IFX2 452 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Gpr150Q8BL07 427 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 OplahQ8K010 1288 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tbc1d22aQ8R5A6 516 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rpn1Q91YQ5 608 aaKnown RBP16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Dsg3O35902 993 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Clcn3P51791 818 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Cdo1P60334 200 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 RnaselQ05921 735 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Khdrbs1Q60749 443 aaKnown RBP16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Dclre1bQ8C7W7 541 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Rassf3Q99P51 232 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Pgm1Q9D0F9 562 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Tekt1Q9DAJ2 418 aa16.33■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 C2cd2E9Q3C1 696 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ccdc153P0C7Q1 202 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Ankmy2Q3TPE9 440 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Dlg4Q62108 724 aa16.32■□□□□ 0.2
Ccdc88b-201ENSMUST00000113440 Vil1Q62468 827 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms