RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Arhgap26Q6ZQ82 814 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Nim1kQ8BHI9 436 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pcdha10Q91Y20 946 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Fam162aQ9D6U8 155 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Fam129cD3YZB0 591 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tlk2O55047 718 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Rasip1Q3U0S6 961 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Rc3h1Q4VGL6 1130 aaKnown RBP7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Eps15l1Q60902 907 aaKnown RBP7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Scd4Q6T707 353 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Zfp566Q8VCI1 386 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Atp6v1b1Q91YH6 513 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Gm32742A0A1B0GT42 1604 aa7.05□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pms2P54279 859 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Hddc2Q3SXD3 199 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Alkbh8Q80Y20 664 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Leng8Q8CBY3 785 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tesk2Q8VCT9 570 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pdk2Q9JK42 407 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Abhd2Q9QXM0 425 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Atp6v0a1Q9Z1G4 839 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Aff1O88573 1216 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 AgtP11859 477 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Kcna3P16390 528 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Brinp3Q499E0 766 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Bcap29Q61334 240 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Map3k10Q66L42 940 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Grm4Q68EF4 912 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 HlfQ8BW74 295 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Epc2Q8C0I4 808 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Txndc9Q9CQ79 226 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mad2l2Q9D752 211 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Eif2ak3Q9Z2B5 1114 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Kiaa0100Q5SYL3 2234 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tmem132bF7BAB2 1078 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tal1P22091 329 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 PtpreP49446 699 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Gcnt1Q09324 428 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Ccdc151Q8BSN3 593 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Zhx2Q8C0C0 836 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Reep2Q8VCD6 254 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mccc1Q99MR8 717 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Slc22a3Q9WTW5 551 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Kank3Q9Z1P7 791 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Rap1gds1E9Q912 607 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tmprss11aQ3UQ41 389 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Trpc1Q61056 793 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Letm2Q7TNU7 480 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Capn10Q9ESK3 666 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Asah2Q9JHE3 756 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Cct7P80313 544 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Kcna5Q61762 602 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Armc12Q80X86 340 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Med21Q9CQ39 144 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Klhl28Q9CR40 571 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Rpn2Q9DBG6 631 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mindy4b-psA0A1W2P7H6 457 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Eif3dO70194 548 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Men1O88559 611 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mtco1P00397 514 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 WapP01173 134 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Sipa1P46062 1037 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Arhgef9Q3UTH8 516 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mars2Q499X9 586 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Q6GQU0 248 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Zfp512bQ6PHP4 879 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 AarsQ8BGQ7 968 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Vcpip1Q8CDG3 1220 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mtss1Q8R1S4 759 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Dip2aQ8BWT5 1523 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pramef20B1ARV6 477 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Akap1O08715 857 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Ass1P16460 412 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Psd3Q2PFD7 1037 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Arhgap44Q5SSM3 814 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Hspa1aQ61696 641 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Tdpoz3Q717B4 365 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Polr2eQ80UW8 210 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 NclnQ8VCM8 563 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Ddx47Q9CWX9 455 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Wdr64Q9D565 1086 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Extl2Q9ES89 330 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Setd1aE9PYH6 1716 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 CpdO89001 1377 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Lrrc4bP0C192 709 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Mmp20P57748 482 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Meis3P97368 378 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Rufy4Q3TYX8 563 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Ppp1r1bQ60829 194 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Snx9Q91VH2 595 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 PrameQ9D4Z5 464 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Apol8A2VDH7 339 aaKnown RBP7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Gm3173A6NAS3 172 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Gm3020E9Q3J7 150 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Gm2897K7N6T7 172 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 TpbpaP13438 124 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pou4f1P17208 421 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Cdk4P30285 303 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Pcsk1P63239 753 aa7.04□□□□□ -1.28
Scn8a-205ENSMUST00000108910 Klra9Q2TJJ8 266 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms