RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 ArP19091 899 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tnfrsf4P47741 272 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ppp2cbP62715 309 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ppp2caP63330 309 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Nxf3Q4ZGD9 553 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cd34Q64314 382 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 GartQ64737 1010 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Q8BGN9 141 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Bri3bpQ8BXV2 253 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Aldh1l1Q8R0Y6 902 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 RfxapQ8VCG9 231 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 ZgpatQ8VDM1 511 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Pcdhb15Q91Y04 786 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ankrd10Q99LW0 415 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cnn3Q9DAW9 330 aaKnown RBP8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Mrpl4Q9DCU6 294 aaKnown RBP8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Shank2Q80Z38 1476 aa8.45□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ddx23D3Z0M9 819 aaKnown RBP8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gimap9G3X987 291 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ncf2O70145 525 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Zfy2P20662 777 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Crhr1P35347 415 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 CanxP35564 591 aaKnown RBP8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Il12bP43432 335 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cacnb3P54285 484 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tnfrsf26P83626 204 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 AmbpQ07456 349 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Aarsd1Q3THG9 412 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tnfrsf8Q60846 498 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Dzip1Q8BMD2 852 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tmem119Q8R138 280 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Olfr801Q8VEU1 318 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Col13a1Q9R1N9 751 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tnfsf13bQ9WU72 309 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Kif16bB1AVY7 1312 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Fer1l6E0CZ42 1862 aa8.44□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 InhbeO08717 350 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Mpp1P70290 466 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Inf2Q0GNC1 1273 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Krt2Q3TTY5 707 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 AgaQ64191 346 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Fam214aQ69ZK7 1075 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Smg5Q6ZPY2 1017 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tspyl2Q7TQI8 677 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Rapgef5Q8C0Q9 814 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Hectd2Q8CDU6 774 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Adprhl2Q8CG72 370 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 TapbplQ8VD31 451 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Rbm47Q91WT8 590 aaKnown RBP8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Bbs10Q9DBI2 713 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Telo2Q9DC40 840 aaKnown RBP8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 SerhlQ9EPB5 311 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Znf287Q9EQB9 759 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Herpud2Q9JJC9 404 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Sec61a2Q9JLR1 476 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Robo1O89026 1612 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Tnks1bp1P58871 1720 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Mast2Q60592 1734 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ltbp1Q8CG19 1712 aa8.43□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Palm3A2TJV2 734 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gm3460E9QAI8 215 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Nsmce4aG3XA30 381 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Ccdc191J3QQ27 883 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 NnmtO55239 264 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Itgb2P11835 771 aaKnown RBP8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Adam5Q3TTE0 751 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Znf496Q5SXI5 585 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Atp13a3Q5XF89 1219 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 WdcpQ6NV72 663 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 RalylQ8BTF8 293 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Dzank1Q8C008 778 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Vps53Q8CCB4 832 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cdkal1Q91WE6 578 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Prc1Q99K43 603 aaKnown RBP8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Amotl1Q9D4H4 968 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Spata1Q9D5R4 444 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 P2yr13Q9D8I2 337 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Mbnl1Q9JKP5 341 aaKnown RBP8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Dgat1Q9Z2A7 498 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Astn2Q80Z10 1352 aa8.42□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cdk12Q14AX6 1484 aaKnown RBP8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Kif3cO35066 796 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Casp14O89094 257 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Mt-CybP00158 381 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Fam167bP17257 162 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Rab24P35290 203 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cd22P35329 862 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Specc1lQ2KN98 1118 aaKnown RBP8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Cd163Q2VLH6 1121 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Snrnp27Q8K194 155 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Pcdhga9Q91XX9 932 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 P33monoxQ9DBN4 303 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Spry4Q9WTP2 300 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Vnn1Q9Z0K8 512 aa8.41□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Akap11E9Q777 1895 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gm17949A0A1B0GRV7 212 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Skint7A7XV04 395 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Gtpbp1O08582 668 aaKnown RBP8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Fgf18O89101 207 aa8.4□□□□□ -1.06
Ccdc54-201ENSMUST00000062439 Pik3r6Q3U6Q4 756 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms