RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 rp9P97762 213 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Neurl1bQ0MW30 546 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Fbxo39Q5NBU5 443 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Acap2Q6ZQK5 770 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Fbxl5Q8C2S5 690 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Erbb2P70424 1256 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 RetsatQ64FW2 609 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 GmipQ6PGG2 971 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Trerf1Q8BXJ2 1205 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Dhx35A2ACQ1 703 aaKnown RBP19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Wdr72D3YYM4 1114 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Slc30a9Q5IRJ6 567 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Shc3Q61120 474 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Celf4Q7TSY6 486 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pan2Q8BGF7 1200 aaKnown RBP19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Q9CYI0 393 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Osbpl7A2A716 963 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 6030498E09RikB1AX85 169 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Odc1P00860 461 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pip5kl1Q6U7H8 395 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Trim35Q8C006 501 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ppp1r2Q9DCL8 206 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Map3k20Q9ESL4 802 aaKnown RBP19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Dnajc7Q9QYI3 494 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Q6DFW0 481 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tsen34Q8BMZ5 316 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Nsmce3Q9CPR8 279 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zfp358E9Q8M1 571 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 ZfaP23607 742 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 InscQ3HNM7 579 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zcchc2Q69ZB8 1166 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tgif2lx2Q8K5B9 231 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Vwa1Q8R2Z5 415 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 PmpcbQ9CXT8 489 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 MymkQ9D1N4 221 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Mdc1Q5PSV9 1707 aa19.28■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tmed1Q3V009 227 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Stip1Q60864 543 aaKnown RBP19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Them6Q80ZW2 207 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Galnt5Q8C102 930 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 4930523C07RikE9Q2T4 99 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cog3Q8CI04 820 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Nudt12Q9DCN1 462 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Lgr5Q9Z1P4 907 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Kank3Q9Z1P7 791 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Gm382B1AXN3 1250 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Glud1P26443 558 aaKnown RBP19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 OgtQ8CGY8 1046 aa19.27■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Gm4307E9PZY4 289 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm4312K9J7E2 289 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ppargc1aO70343 797 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 AlbP07724 608 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 GclcP97494 637 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Itih1Q61702 907 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fam107aQ78TU8 144 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Dcun1d2Q8BZJ7 259 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Mrps31Q61733 384 aaKnown RBP19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rusc1Q8BG26 893 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Armc6Q8BNU0 468 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 GanQ8CA72 597 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Tada3Q8R0L9 432 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cmtr1Q9DBC3 837 aa19.27■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm7086A0A1W2P766 342 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm3424L7N298 263 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm8246M0QWX9 263 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ssxb10Q6XAR7 170 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Snx17Q8BVL3 470 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Nt5c3aQ9D020 331 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Msx3P70354 204 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 CpQ61147 1061 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Antxr2Q6DFX2 487 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 TwnkQ8CIW5 685 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rnf31Q924T7 1066 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Nek3Q9R0A5 511 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Zscan4-ps1A0A1C7CYV3 506 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Zscan4dA7KBS4 506 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Zfp846G3X996 541 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ifnar1P33896 590 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Inpp1P49442 396 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Wfs1P56695 890 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Zscan4fQ3URS2 506 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Zscan4cQ80VJ6 506 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Neu2Q9JMH3 379 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 DnmbpQ6TXD4 1580 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm3095E9Q058 166 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 B3gat3P58158 335 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gja5Q01231 358 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 HdxQ14B70 692 aa19.26■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm21964A0A1W2P7S4 437 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Xirp1O70373 1129 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Dnph1Q80VJ3 173 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 BfarQ8R079 450 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 EloblA6PWE0 161 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 3830417A13RikQ8BQJ2 303 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Naaladl2A0A0N4SUJ3 795 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Tbkbp1A2A9T0 611 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ppef2O35385 757 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cd19P25918 547 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Tcaf1Q8BNE1 924 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ccdc137Q8R0K4 290 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms