RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Srgap2Q91Z67 1071 aa24.39■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Rab11fip1Q9D620 645 aa24.39■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Sfmbt1Q9JMD1 863 aa24.39■■□□□ 1.49
Upf3a-201ENSMUST00000043767 ThadaA8C756 1938 aa24.39■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Scn1aA2APX8 2009 aa24.39■■□□□ 1.49
Upf3a-201ENSMUST00000043767 RargP18911 458 aaKnown RBP24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Inppl1Q6P549 1257 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gucy2gQ6TL19 1100 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Fmnl3Q6ZPF4 1028 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Pnma2Q8BHK0 365 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Psmd5Q8BJY1 504 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 CarfQ8VHI4 689 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Calr3Q9D9Q6 380 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gtf2h1Q9DBA9 547 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Zfr2E9Q5M4 874 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Shmt1P50431 478 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Cdh8P97291 799 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Ptgs2Q05769 604 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Tlr11Q6R5P0 926 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Fbxl5Q8C2S5 690 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gpc3Q8CFZ4 579 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Mmgt1Q8K273 131 aaKnown RBP24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Clstn3Q99JH7 956 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Map4k3Q99JP0 894 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Arfgap2Q99K28 520 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gtf3c6Q9D8P7 227 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Rnf14Q9JI90 485 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Msl3Q9WVG9 525 aa24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Wdr46Q9Z0H1 622 aaKnown RBP24.38■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Dpy19l4A2AJQ3 722 aa24.37■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Znf12Q7TSI0 686 aa24.37■■□□□ 1.49
Upf3a-201ENSMUST00000043767 MiosQ8VE19 875 aa24.37■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Setd3Q91WC0 594 aa24.37■■□□□ 1.49
Upf3a-201ENSMUST00000043767 B4galt4Q9JJ04 344 aa24.37■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Spata31d1dE9Q5W2 1247 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Enc1O35709 589 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Btg4O70552 250 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Ass1P16460 412 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Tatdn3Q3U1C6 294 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Rmdn3Q3UJU9 470 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Sorbs1Q62417 1290 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Prl7b1Q8CGZ9 251 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 PirQ9D711 290 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Dkc1Q9ESX5 509 aaKnown RBP24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Foxe3Q9QY14 288 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Kiaa0100Q5SYL3 2234 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Pex10B1AUE5 324 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Zfp266E9Q2S7 604 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Zfp358E9Q8M1 571 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Lrrc6O88978 473 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Chmp6P0C0A3 200 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gprc5aQ8BHL4 356 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Kif2bQ8C0N1 668 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 ClmnQ8C5W0 1052 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Rftn2Q8CHX7 500 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Erlin1Q91X78 346 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Tom1l1Q923U0 474 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Mrpl2Q9D773 306 aaKnown RBP24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 ThegQ9JMB1 375 aa24.36■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Serpinh1P19324 417 aaKnown RBP24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Cdc25cP48967 447 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Ppm1aP49443 382 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Sparcl1P70663 650 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Prdx5P99029 210 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Sh3bp2Q06649 559 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Ccdc157Q5SPX1 718 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Nucks1Q80XU3 234 aaKnown RBP24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Spata20Q80YT5 790 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Slc13a4Q8BZ82 625 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Il17cQ8K4C5 194 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Arid3bQ9Z1N7 568 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Dock3Q8CIQ7 2027 aa24.35■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gm4756A0A140LIS8 335 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Slc4a11A2AJN7 862 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gm12394A2AKP6 982 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gm10721J3QPJ9 223 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 JchainP01592 159 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Dusp11Q6NXK5 321 aaKnown RBP24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Frmd5Q6P5H6 517 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 GnsQ8BFR4 544 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Kdm7aQ3UWM4 940 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Znf235Q61116 645 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Tmem220Q8BP07 167 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Usp15Q8R5H1 981 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Chst12Q99LL3 419 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Ftsj3Q9DBE9 838 aaKnown RBP24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Nup50Q9JIH2 466 aaKnown RBP24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Cacng4Q9JJV4 327 aa24.34■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Fpr-rs4A4FUQ5 323 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Gm1758F6VZZ1 202 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Smpd1Q04519 627 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Plk1Q07832 603 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Nek10Q3UGM2 1111 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Krt35Q497I4 455 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Olfr1046Q7TR79 316 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Trim6Q8BGE7 488 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Fam78aQ8C552 283 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Q8CCC3 530 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 Fuca1Q99LJ1 452 aa24.33■■□□□ 1.49
Upf3a-201ENSMUST00000043767 SyncQ9EPM5 470 aa24.33■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms