RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 NostrinQ6WKZ7 506 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sept11Q8C1B7 431 aaKnown RBP12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Smtnl2Q8CI12 456 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 FdpsQ920E5 353 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Creld2Q9CYA0 350 aa12.51□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Capn2O08529 700 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Kcnj11Q61743 390 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Myo6Q64331 1265 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Clasp2Q8BRT1 1286 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fam118bQ8C569 351 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cabcoco1Q8CDT7 208 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Calcoco1Q8CGU1 691 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ints9Q8K114 658 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tada3Q8R0L9 432 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cog4Q8R1U1 785 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sgms1Q8VCQ6 419 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cyp2c50Q91X77 490 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sh2b2Q9JID9 621 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm28036V9GXJ1 658 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm8113E0CXS8 587 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gap43P06837 227 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Armc7Q3UJZ3 198 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tmtc1Q3UV71 942 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Btbd6Q8K2J9 488 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rabep2Q91WG2 554 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Dnajc19Q9CQV7 116 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ppp1r3gQ9CW07 347 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q9D1F3 157 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm9774A0A0A6YVU8 407 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cyth3O08967 399 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Clcn6O35454 870 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cops5O35864 334 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Odc1P00860 461 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lamp1P11438 406 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Slc16a1P53986 493 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Smad1P70340 465 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Drp2Q05AA6 957 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pacsin1Q61644 441 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 RubcnQ80U62 956 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cdk5rap3Q99LM2 503 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Thumpd2Q9CZB3 528 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q9D937 123 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Atp6v0a1Q9Z1G4 839 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ambra1A2AH22 1300 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Il13ra2O88786 383 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Serpina5P70458 405 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fdxacb1Q3UY23 622 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 CttnQ60598 546 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Myl6Q60605 151 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp512bQ6PHP4 879 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 RbakQ8BQC8 711 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn1r203Q8R273 311 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Trim42Q9D2H5 723 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 SerhlQ9EPB5 311 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rab27aQ9ERI2 221 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tll2Q9WVM6 1012 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lrp6O88572 1613 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp597E9Q6S0 419 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Xirp1O70373 1129 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fcer2P20693 331 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rbm20Q3UQS8 1199 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Klra6Q60653 266 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Foxn1Q61575 648 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Jade1Q6ZPI0 834 aaKnown RBP12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fam122aQ9DB52 284 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Dcaf6Q9DC22 876 aa12.5□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm1758F6VZZ1 202 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 EsrraO08580 422 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 JchainP01592 159 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Uhmk1P97343 419 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Yy1Q00899 414 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ogfod1Q3U0K8 545 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Spata20Q80YT5 790 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Snx17Q8BVL3 470 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 6030498E09RikB1AX85 169 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lekr1B2RVN1 116 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vsnl1P62761 191 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ext2P70428 718 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 G3bp2P97379 482 aaKnown RBP12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ap5z1Q3U829 807 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sema5aQ62217 1077 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Plppr4Q7TME0 766 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr670Q7TRP3 312 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 WhrnQ80VW5 918 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tdp1Q8BJ37 609 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Mical2Q8BML1 960 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Prr33Q8C494 260 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cep83Q9D5R3 692 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tjap1Q9DCD5 539 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Maged2Q9ER67 616 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rexo5D3YW29 759 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rgs22G3UYX5 1258 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lig3P97386 1015 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tspyl5Q69ZB3 406 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ssxb10Q6XAR7 170 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 TwistnbQ78WZ7 330 aaKnown RBP12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr212Q7TS33 327 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Txndc5Q91W90 417 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 AticQ9CWJ9 592 aaKnown RBP12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vav3Q9R0C8 847 aa12.49□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms