RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Lonrf1D3YY23 762 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Slc4a9E9PUP3 929 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Cyp2d9P11714 504 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Atg4cQ811C2 458 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hacd3Q8K2C9 362 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rpn1Q91YQ5 608 aaKnown RBP17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ubxn11Q9D572 484 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 PigoQ9JJI6 1093 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Zfyve9A2A8R0 1397 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 BhmtO35490 407 aaKnown RBP17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Slc16a2O70324 545 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Nptx2O70340 429 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gnl1P36916 607 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Gprin1Q3UNH4 932 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Adcy2Q80TL1 1090 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ago4Q8CJF8 861 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tlr9Q9EQU3 1032 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 ErmapQ9JLN5 566 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 PodxlQ9R0M4 503 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 M1apQ9Z0E1 529 aa17.4■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Akap12Q9WTQ5 1684 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Klhl41A2AUC9 606 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mms22lB1AUR6 1238 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Kcna1P16388 495 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Hoxd10P28359 340 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Nedd1P33215 660 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Kcna2P63141 499 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cyfip2Q5SQX6 1253 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ppp1r1bQ60829 194 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Shc3Q61120 474 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Oca2Q62052 833 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tmcc1Q69ZZ6 649 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 B3galnt2Q8BG28 504 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cog3Q8CI04 820 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Trpv6Q91WD2 767 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rps6kb2Q9Z1M4 485 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm8113E0CXS8 587 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mtco1P00397 514 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lig1P37913 916 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Agr3Q8R3W7 165 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Snx5Q9D8U8 404 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Kank3Q9Z1P7 791 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Bub1bQ9Z1S0 1052 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 March10E9PX79 788 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Akap1O08715 857 aaKnown RBP17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Alkbh1P0CB42 389 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 PorP37040 678 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rtkn2Q14B46 604 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 SnrpaQ62189 287 aaKnown RBP17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ulbp1Q8HWA3 334 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Prg3Q9JL95 222 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Nrxn1Q9CS84 1514 aa17.39■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tlk2O55047 718 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tlx1P43345 332 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Scd4Q6T707 353 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Smtnl2Q8CI12 456 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tldc1Q8K0P3 455 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Sept12Q9D451 317 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Scyl3Q9DBQ7 735 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lmnb1P14733 588 aaKnown RBP17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Sco1Q5SUC9 284 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Szrd1Q6NXN1 152 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Fam107aQ78TU8 144 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 HpdlQ8K248 371 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pglyrp2Q8VCS0 530 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ppef2O35385 757 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mpp3O88910 568 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lsg1Q3UM18 644 aaKnown RBP17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pdk1Q8BFP9 434 aaKnown RBP17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Sun2Q8BJS4 731 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Armc6Q8BNU0 468 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Nlrp4aQ8BU40 982 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cdk17Q8K0D0 523 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Kif19Q99PT9 997 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rhobtb1Q9DAK3 695 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ddx39bQ9Z1N5 428 aaKnown RBP17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Scgb2b18A0A087WPA9 112 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ndufs6P52503 116 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Prl2c1Q5SVL9 228 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gucy2gQ6TL19 1100 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Snx9Q91VH2 595 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Smyd3Q9CWR2 428 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Abcc10Q8R4P9 1501 aa17.38■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Hsdl2Q2TPA8 490 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Chi3l1Q61362 389 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Zfp90Q61967 636 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tfe3Q64092 572 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ttc22Q8C159 568 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Znf687Q9D2D7 1237 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Atp6v0a1Q9Z1G4 839 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cdh18E9Q9Q6 790 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 ChrngP04760 519 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Kcnk9Q3LS21 402 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 GmpsQ3THK7 693 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Plekha7Q3UIL6 1118 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Brd9Q3UQU0 596 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Arhgap44Q5SSM3 814 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Wnk4Q80UE6 1222 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Trim36Q80WG7 729 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ano4Q8C5H1 955 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms