RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Scaf8Q6DID3 1268 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Garem2Q6PAJ3 880 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 LdhdQ7TNG8 484 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Slitrk1Q810C1 696 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Hook3Q8BUK6 718 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Adgrg2Q8CJ12 1009 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Ttc8Q8VD72 515 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Gbp7Q91Z40 638 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Clcn2Q9R0A1 908 aa19.46■□□□□ 0.71
Ccdc3-201ENSMUST00000027988 Mybl1P51960 751 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Kcnn2P58390 839 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ece1Q4PZA2 769 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 A1cfQ5YD48 595 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Stip1Q60864 543 aaKnown RBP19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Rell1Q8K2J7 272 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cdk5rap3Q99LM2 503 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Q9CYI0 393 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 SktA2AQ25 1946 aaKnown RBP19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Rbp3P49194 1234 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Mmp20P57748 482 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ripk2P58801 539 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 GmncQ3URY2 333 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cnga4Q3UW12 575 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Gm4952Q5FW57 296 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Frmd5Q6P5H6 517 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Stk38lQ7TSE6 464 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Kbtbd13Q8C828 458 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Usp11Q99K46 921 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Pdzd4Q9QY39 772 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Slc22a3Q9WTW5 551 aa19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Noc2lQ9WV70 747 aaKnown RBP19.45■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Zfp839E9PUU5 921 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cyp4f40G3UW81 524 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Stra6O70491 670 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Slc10a4Q3UEZ8 437 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Camta2Q80Y50 1208 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Wdtc1Q80ZK9 677 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Il33Q8BVZ5 266 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ddx39aQ8VDW0 427 aaKnown RBP19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Rpn1Q91YQ5 608 aaKnown RBP19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cdk9Q99J95 372 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Isl2Q9CXV0 359 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Tmem81Q9D5K1 259 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Nop56Q9D6Z1 580 aaKnown RBP19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Arih1Q9Z1K5 555 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ttc7bE9Q6P5 843 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 GckP52792 465 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Uchl4P58321 233 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Foxp2P58463 714 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ankmy2Q3TPE9 440 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Kiaa1328Q6NZK5 612 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Q8VDP2 222 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Bco2Q99NF1 532 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Dgcr8Q9EQM6 773 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Map3k20Q9ESL4 802 aaKnown RBP19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Pdcd7Q9WTY1 482 aa19.44■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Mocs3A2BDX3 460 aaKnown RBP19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ccdc152E9PX14 254 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Capn6O35646 641 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 PdgfraP26618 1089 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cops2P61202 443 aaKnown RBP19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Trim72Q1XH17 477 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Fam81aQ3UXZ6 364 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Tmprss11eQ5S248 423 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cyp3a16Q64481 504 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 PreplQ8C167 725 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Smtnl2Q8CI12 456 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Tspan8Q8R3G9 235 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Kif9Q9WV04 790 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Abcb11Q9QY30 1321 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Speer2E9Q9U2 264 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Gprin1Q3UNH4 932 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cyp2c67Q569X9 491 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Neto2Q8BNJ6 525 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Mfsd5Q921Y4 450 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 SerhlQ9EPB5 311 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 DpysQ9EQF5 519 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 AuhQ9JLZ3 314 aa19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 PygmQ9WUB3 842 aaKnown RBP19.43■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cdr2lA2A6T1 465 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ctnnal1O88327 731 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Nr3c1P06537 783 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 PrkchP23298 683 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Hsd17b2P51658 381 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Dnali1Q8BVN8 258 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Tmem206Q9D771 350 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Cyp39a1Q9JKJ9 470 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 AspgA0JNU3 564 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Arhgef10lA2AWP8 1280 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Apol8A2VDH7 339 aaKnown RBP19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Lonrf2B2RT44 518 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ildr2B5TVM2 661 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Fgf15O35622 218 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Kcna2P63141 499 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Serpina1eQ00898 413 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Myl6Q60605 151 aaKnown RBP19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Znf507Q6ZPY5 941 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Klhl29Q80T74 875 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Dupd1Q8BK84 215 aa19.42■□□□□ 0.7
Ccdc3-201ENSMUST00000027988 Ino80bQ99PT3 375 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms