RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Slfn9B1ARD6 910 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Cdr1E9Q0B4 517 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Speer2E9Q9U2 264 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Cdk7Q03147 346 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Q14AM7 275 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Map3k9Q3U1V8 1077 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Dnajc6Q80TZ3 938 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Olfml3Q8BK62 406 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Dupd1Q8BK84 215 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Ttc1Q91Z38 292 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Atad3Q925I1 591 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Sdr42e1Q9D665 394 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Prl2a1Q9JHK0 228 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 VdrP48281 422 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Vmn1r209Q5NC97 312 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Fam196bQ6GQV1 535 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Kcns3Q8BQZ8 491 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Trim47Q8C0E3 641 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Epc2Q8C0I4 808 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Sun1Q9D666 913 aaKnown RBP18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 MesdQ9ERE7 224 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Ube4bQ9ES00 1173 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Noa1Q9JJG9 693 aaKnown RBP18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 MycsQ9Z304 431 aa18.71■□□□□ 0.59
Sqstm1-201ENSMUST00000015981 Dock2Q8C3J5 1828 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm11985A0A1B0GS61 206 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 4930544D05RikJ3QK56 214 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Cyp11b2P15539 500 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Scarf2P59222 833 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 rp9P97762 213 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 NfiaQ02780 532 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tmem63bQ3TWI9 832 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Marveld2Q3UZP0 555 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Kiaa0319Q5SZV5 1081 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 P2ry10Q8BFU7 328 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Slc39a13Q8BZH0 361 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ppp1r11Q8K1L5 131 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ddx54Q8K4L0 874 aaKnown RBP18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Olfr449Q8VGW8 311 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Pcdha3Q91Y16 942 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Hspbp1Q99P31 357 aaKnown RBP18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Isl2Q9CXV0 359 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mxra7Q9CZH7 178 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 IcmtQ9EQK7 283 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Sfmbt1Q9JMD1 863 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Azi2Q9QYP6 405 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Crlf3Q9Z2L7 442 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 1700003F12RikA2AKE5 210 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Serpinb8O08800 374 aaKnown RBP18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Banf1O54962 89 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ptpn20O55082 426 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ptp4a2O70274 167 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ccnb1P24860 430 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 UrosP51163 265 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Stx2Q00262 289 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tigd5Q499M4 642 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Slc7a6osQ7TPE5 306 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tph2Q8CGV2 488 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Depdc1aQ8CIG0 804 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Znf426Q8R1D1 550 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 QpctQ9CYK2 362 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Styxl1Q9DAR2 321 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 CtsfQ9R013 462 aa18.7■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Usp51B1AY15 661 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 DldO08749 509 aaKnown RBP18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Dusp8O09112 663 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 AgxtO35423 414 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 CaluO35887 315 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Cyp2a4P15392 494 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Cyp2a5P20852 494 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tfap2aP34056 437 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Lrrc43Q3V0L5 667 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Arhgap20Q6IFT4 1182 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vmn2r26Q6TAC4 855 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Rhot1Q8BG51 631 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Uba6Q8C7R4 1053 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Ago4Q8CJF8 861 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Txnrd3Q99MD6 652 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Akt1s1Q9D1F4 257 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gtf3c6Q9D8P7 227 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tm9sf1Q9DBU0 606 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Rnf6Q9DBU5 667 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Prl6a1O35257 230 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 AladP10518 330 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Mark2Q05512 776 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 RfflQ6ZQM0 377 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Fbxo11Q7TPD1 930 aaKnown RBP18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Fbxo43Q8CDI2 640 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Fam20aQ8CID3 541 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Dcaf8Q8N7N5 591 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Tex19.1Q99MV2 351 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Slc22a3Q9WTW5 551 aa18.69■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm16430A6X8J1 155 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vmn2r63E9Q0K5 859 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm9268E9Q0M3 861 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Gm10250G3X9L6 160 aaKnown RBP18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Vmn2r62K7N712 859 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 PdgfraP26618 1089 aa18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 Cyth2P63034 400 aaKnown RBP18.68■□□□□ 0.58
Sqstm1-201ENSMUST00000015981 4930430A15RikQ05AC5 485 aa18.68■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms