RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Adgre1Q61549 931 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ddr2Q62371 854 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rad9bQ6WBX7 403 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Snx14Q8BHY8 964 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cog3Q8CI04 820 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Fam133bQ9CVI2 245 aaKnown RBP12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 AticQ9CWJ9 592 aaKnown RBP12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ddx56Q9D0R4 546 aaKnown RBP12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 SerhlQ9EPB5 311 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Gucy1a3Q9ERL9 691 aa12.7□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Nup62clA2AG10 272 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Clcn6O35454 870 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 JchainP01592 159 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Eif3eP60229 445 aaKnown RBP12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 RnaselQ05921 735 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cyp2j11Q3UNV2 504 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Lrrc55Q3UY51 311 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cyp2c66Q5GLZ0 490 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Fhod1Q6P9Q4 1197 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Fsd1lQ8BYN5 507 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ccdc159Q8C963 411 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Slc35f6Q8VE96 372 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 1700123K08RikQ9D991 295 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Mettl1Q9Z120 268 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Prdm12A2AJ77 365 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cdh18E9Q9Q6 790 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rgs2O08849 211 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Smyd1P97443 490 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Klra6Q60653 266 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Q6DFW0 481 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Stk38lQ7TSE6 464 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Tmtc4Q8BG19 741 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ttc16Q8C1F5 767 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Arhgap18Q8K0Q5 663 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 OafQ8QZR4 282 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rhox3cA2AWM0 215 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Gm8909G3UXE9 396 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rhox3hL7MU37 215 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Trdmt1O55055 415 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Lrriq3Q14DL3 633 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rhox3aQ4TU90 215 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 CybbQ61093 570 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rassf4Q8CB96 322 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Celf3Q8CIN6 465 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 B4galt5Q9JMK0 388 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 CluhQ5SW19 1315 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 1700017N19RikA0A087WPJ1 469 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Zfp626A0A0U1RQ84 676 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Camk4P08414 469 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 NrlP54846 237 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Vsnl1P62761 191 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ppp1r7Q3UM45 361 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Slain1Q68FF7 579 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Adck2Q6NSR3 617 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 TwistnbQ78WZ7 330 aaKnown RBP12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Tmem169Q8BG50 297 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Lrrc8cQ8R502 803 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cuedc2Q9CXX9 284 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Klrc1Q9Z202 244 aa12.69□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Gigyf2Q6Y7W8 1291 aaKnown RBP12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Tmc3Q7TQ69 1130 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Skida1Q80YR3 822 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Pak4Q8BTW9 593 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Kcnv1Q8BZN2 503 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 FdpsQ920E5 353 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Zbed3Q9D0L1 228 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Dach1Q9QYB2 751 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ddx39bQ9Z1N5 428 aaKnown RBP12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Nlrp1bA1Z198 1177 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Supt3B0QZW4 406 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ctnnd1P30999 938 aaKnown RBP12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 GaaP70699 953 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ptgs2Q05769 604 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ppp1r13lQ5I1X5 824 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Atp11bQ6DFW5 1175 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 B3galnt2Q8BG28 504 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Abraxas1Q8BPZ8 407 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Aldh4a1Q8CHT0 562 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Dlk2Q8K1E3 382 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Chordc1Q9D1P4 331 aaKnown RBP12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 ParvaQ9EPC1 372 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Sept3Q9Z1S5 350 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Mon2Q80TL7 1715 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 TnfP06804 235 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Rab6bP61294 208 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Mansc4Q3UU94 337 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Nt5c2Q3V1L4 560 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Sh2d1b2Q45HK4 132 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Tdpoz3Q717B4 365 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ric8bQ80XE1 520 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Pih1h3bQ8C6P5 218 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 OplahQ8K010 1288 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 AagabQ8R2R3 316 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ndfip2Q91ZP6 311 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Znhit2Q9QY66 399 aa12.68□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Gm36028A0A0U1RPM1 299 aa12.67□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Apol7bB1AQP7 369 aa12.67□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Cyp2f2P33267 491 aa12.67□□□□□ -0.38
Ctr9-201ENSMUST00000005749 Ppp3caP63328 521 aa12.67□□□□□ -0.38
Ctr9-201ENSMUST00000005749 ZbbxQ0P5X5 716 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms