RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Trim43bP86448 445 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Tgfbrap1Q3UR70 860 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Fam81aQ3UXZ6 364 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Tab3Q571K4 716 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 LnpkQ7TQ95 425 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Ankfy1Q810B6 1169 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Senp7Q8BUH8 1037 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Hook3Q8BUK6 718 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 DnerQ8JZM4 737 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Ugt3a2Q8JZZ0 523 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Scrn2Q8VCA8 425 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Plekhh3Q8VCE9 796 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Ttc8Q8VD72 515 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Cuedc2Q9CXX9 284 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Snf8Q9CZ28 258 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Hao1Q9WU19 370 aa17.39■□□□□ 0.37
Shh-201ENSMUST00000002708 Ttc7bE9Q6P5 843 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 UrosP51163 265 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Adamts10P58459 1104 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Creb3l2Q8BH52 521 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Ddx39aQ8VDW0 427 aaKnown RBP17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Fam47eD3YWC7 402 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Gm5795E9PZN8 263 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Atp2a2O55143 1044 aaKnown RBP17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Ets2P15037 468 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Cnga4Q3UW12 575 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Ppm1kQ8BXN7 372 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Ppm1fQ8CGA0 452 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Caskin2Q8VHK1 1201 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Emc2Q9CRD2 297 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Rab11fip1Q9D620 645 aa17.38■□□□□ 0.37
Shh-201ENSMUST00000002708 Megf6Q80V70 1572 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Tnfrsf18O35714 228 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 PrlP06879 226 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Tulp2P46686 562 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Gad2P48320 585 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Rfx2P48379 717 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 PtpreP49446 699 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Ect2Q07139 913 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Atp13a5Q3TYU2 1216 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Zcwpw1Q6IR42 630 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Vmn2r26Q6TAC4 855 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Ago2Q8CJG0 860 aaKnown RBP17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Pcdha2Q91Y17 948 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Tmem81Q9D5K1 259 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Pdk2Q9JK42 407 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Trip11E9Q512 1976 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Lonrf2B2RT44 518 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 GnazO70443 355 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 CopeO89079 308 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Psen1P49769 467 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Taf1bP97358 586 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Pla2g6P97819 807 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Azin2Q8BVM4 459 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Myef2Q8C854 591 aaKnown RBP17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Bzw1Q9CQC6 419 aaKnown RBP17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 NrapQ80XB4 1728 aa17.37■□□□□ 0.37
Shh-201ENSMUST00000002708 Plcg1Q62077 1302 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Abcb11Q9QY30 1321 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Ildr2B5TVM2 661 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 PtpraP18052 829 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Akr1b8P45377 316 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 NsfP46460 744 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Frg1P97376 258 aaKnown RBP17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Yy1Q00899 414 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Grm2Q14BI2 872 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Dzip1lQ499E4 774 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Dsg1aQ61495 1057 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Setd6Q9CWY3 473 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Tmed5Q9CXE7 229 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 PdiltQ9DAN1 588 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Clec4aQ9QZ15 238 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 PygmQ9WUB3 842 aaKnown RBP17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Kif9Q9WV04 790 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Prdm12A2AJ77 365 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Clca3bE9PUL3 1044 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Srsf11E9Q6E5 511 aaKnown RBP17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Gm7995L7N2E4 160 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Trove2O08848 538 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Ripk2P58801 539 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Serpina1eQ00898 413 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Sv2cQ69ZS6 727 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Klhdc10Q6PAR0 439 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Gpr150Q8BL07 427 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 NemfQ8CCP0 1064 aaKnown RBP17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Cst12Q9DAN8 128 aa17.36■□□□□ 0.37
Shh-201ENSMUST00000002708 Gon4lQ9DB00 2260 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Gcnt4E9Q649 455 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 CaluO35887 315 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Rpl7aP12970 266 aaKnown RBP17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Rhox5P52651 210 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 St3gal1P54751 337 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Cdca2Q14B71 982 aaKnown RBP17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 ZufspQ3T9Z9 577 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Tom1l2Q5SRX1 507 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Tcaf1Q8BNE1 924 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Rnf25Q9QZR0 456 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 CtsfQ9R013 462 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Col4a3Q9QZS0 1669 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Mmrn2A6H6E2 943 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms