RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	BRN1	P38170	754 aa		6.19	□□□□□ -1.42
CMR3	YPR013C	YFL034W	P43564	1073 aa		6.19	□□□□□ -1.42
CMR3	YPR013C	FPR4	Q06205	392 aa	Predicted RBP	6.19	□□□□□ -1.42
CMR3	YPR013C	STB3	Q12427	513 aa		6.19	□□□□□ -1.42
CMR3	YPR013C	PDC1	P06169	563 aa	Known RBP	6.17	□□□□□ -1.42
CMR3	YPR013C	YJR107W	P47145	328 aa		6.17	□□□□□ -1.42
CMR3	YPR013C	KXD1	P53158	218 aa		6.17	□□□□□ -1.42
CMR3	YPR013C	JIP5	Q06214	492 aa	Predicted RBP	6.17	□□□□□ -1.42
CMR3	YPR013C	FRT1	Q99332	602 aa		6.17	□□□□□ -1.42
CMR3	YPR013C	ALD4	P46367	519 aa	Known RBP	6.16	□□□□□ -1.42
CMR3	YPR013C	DOS2	P54858	310 aa		6.16	□□□□□ -1.42
CMR3	YPR013C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.16	□□□□□ -1.42	not detected
CMR3	YPR013C	MET4	P32389	672 aa		6.15	□□□□□ -1.42
CMR3	YPR013C	YPL062W	Q02781	134 aa		6.15	□□□□□ -1.42
CMR3	YPR013C	LSO1	Q3E827	93 aa		6.15	□□□□□ -1.42
CMR3	YPR013C	MIP1	P15801	1254 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	VAC17	P25591	423 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	IXR1	P33417	597 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	MET1	P36150	593 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	AIM9	P40053	627 aa	Known RBP	6.14	□□□□□ -1.43
CMR3	YPR013C	BRE2	P43132	505 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	CWH41	P53008	833 aa		6.14	□□□□□ -1.43
CMR3	YPR013C	ISR1	Q06098	443 aa	Known RBP	6.14	□□□□□ -1.43
CMR3	YPR013C	PAT1	P25644	796 aa	Known RBP	6.13	□□□□□ -1.43
CMR3	YPR013C	HAL5	P38970	855 aa	Known RBP	6.13	□□□□□ -1.43
CMR3	YPR013C	PAC1	P39946	494 aa	Known RBP	6.13	□□□□□ -1.43
CMR3	YPR013C	SPR3	P41901	512 aa		6.13	□□□□□ -1.43
CMR3	YPR013C	HXT10	P43581	546 aa		6.13	□□□□□ -1.43
CMR3	YPR013C	BDP1	P46678	594 aa		6.13	□□□□□ -1.43
CMR3	YPR013C	SPT2	P06843	333 aa	Predicted RBP	6.12	□□□□□ -1.43
CMR3	YPR013C	UBP1	P25037	809 aa		6.12	□□□□□ -1.43
CMR3	YPR013C	NTH2	P35172	780 aa		6.12	□□□□□ -1.43
CMR3	YPR013C	SPC42	P36094	363 aa		6.12	□□□□□ -1.43
CMR3	YPR013C	RRN7	P40992	514 aa		6.12	□□□□□ -1.43
CMR3	YPR013C	MAG2	Q06436	670 aa	Known RBP	6.12	□□□□□ -1.43
CMR3	YPR013C	HDA3	Q06623	655 aa		6.12	□□□□□ -1.43
CMR3	YPR013C	SUV3	P32580	737 aa		6.11	□□□□□ -1.43
CMR3	YPR013C	NMD2	P38798	1089 aa	Known RBP	6.11	□□□□□ -1.43
CMR3	YPR013C	YAF9	P53930	226 aa		6.11	□□□□□ -1.43
CMR3	YPR013C	FRK1	Q03002	865 aa	Predicted RBP	6.11	□□□□□ -1.43
CMR3	YPR013C	TRS120	Q04183	1289 aa		6.11	□□□□□ -1.43
CMR3	YPR013C	CYT1	P07143	309 aa		6.1	□□□□□ -1.43
CMR3	YPR013C	TPD3	P31383	635 aa		6.1	□□□□□ -1.43
CMR3	YPR013C	ATG20	Q07528	640 aa		6.1	□□□□□ -1.43
CMR3	YPR013C	MNL2	Q12205	849 aa		6.1	□□□□□ -1.43
CMR3	YPR013C	YOL098C	Q12496	1037 aa		6.1	□□□□□ -1.43
CMR3	YPR013C	CDC4	P07834	779 aa		6.09	□□□□□ -1.43
CMR3	YPR013C	MOD5	P07884	428 aa		6.09	□□□□□ -1.43
CMR3	YPR013C	SPT16	P32558	1035 aa	Known RBP	6.09	□□□□□ -1.43
CMR3	YPR013C	BOI1	P38041	980 aa	Known RBP	6.09	□□□□□ -1.43
CMR3	YPR013C	NGR1	P32831	672 aa	Known RBP	6.08	□□□□□ -1.44
CMR3	YPR013C	RRD1	P40454	393 aa	Known RBP	6.08	□□□□□ -1.44
CMR3	YPR013C	FYV10	P40492	516 aa		6.08	□□□□□ -1.44
CMR3	YPR013C	PHO4	P07270	312 aa	Known RBP	6.07	□□□□□ -1.44
CMR3	YPR013C	RPS6A	P0CX37	236 aa	Known RBP	6.07	□□□□□ -1.44
CMR3	YPR013C	RPS6B	P0CX38	236 aa	Predicted RBP	6.07	□□□□□ -1.44
CMR3	YPR013C	MAD1	P40957	749 aa		6.07	□□□□□ -1.44
CMR3	YPR013C	RMD1	Q03441	430 aa		6.07	□□□□□ -1.44
CMR3	YPR013C	RPT1	P33299	467 aa	Known RBP	6.06	□□□□□ -1.44
CMR3	YPR013C	YBR197C	P38306	217 aa		6.06	□□□□□ -1.44
CMR3	YPR013C	VAC8	P39968	578 aa		6.06	□□□□□ -1.44
CMR3	YPR013C	UFD2	P54860	961 aa		6.06	□□□□□ -1.44
CMR3	YPR013C	GPI13	Q07830	1017 aa		6.06	□□□□□ -1.44
CMR3	YPR013C	MCM2	P29469	868 aa		6.05	□□□□□ -1.44
CMR3	YPR013C	GCD6	P32501	712 aa	Known RBP	6.05	□□□□□ -1.44
CMR3	YPR013C	ISC10	P32645	267 aa		6.05	□□□□□ -1.44
CMR3	YPR013C	ALD6	P54115	500 aa	Known RBP	6.05	□□□□□ -1.44
CMR3	YPR013C	SWI5	P08153	709 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	CLN2	P20438	545 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	SRP40	P32583	406 aa	Predicted RBP	6.04	□□□□□ -1.44
CMR3	YPR013C	RNH70	P53331	553 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	FAR11	P53917	953 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	ALD3	P54114	506 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	HED1	Q03937	162 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	SPR28	Q04921	423 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	MET32	Q12041	191 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	PIN2	Q12057	282 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	APC11	Q12157	165 aa		6.04	□□□□□ -1.44
CMR3	YPR013C	PEP7	P32609	515 aa		6.03	□□□□□ -1.44
CMR3	YPR013C	DAK2	P43550	591 aa		6.03	□□□□□ -1.44
CMR3	YPR013C	FOX2	Q02207	900 aa	Known RBP	6.03	□□□□□ -1.44
CMR3	YPR013C	VPS16	Q03308	798 aa		6.03	□□□□□ -1.44
CMR3	YPR013C	MET22	P32179	357 aa		6.02	□□□□□ -1.45
CMR3	YPR013C	UTR2	P32623	467 aa		6.02	□□□□□ -1.45
CMR3	YPR013C	VPS35	P34110	944 aa		6.02	□□□□□ -1.45
CMR3	YPR013C	OSW7	P43611	510 aa		6.02	□□□□□ -1.45
CMR3	YPR013C	CAB1	Q04430	367 aa		6.02	□□□□□ -1.45
CMR3	YPR013C	RPB10	P22139	70 aa		6.01	□□□□□ -1.45
CMR3	YPR013C	KIP2	P28743	706 aa		6.01	□□□□□ -1.45
CMR3	YPR013C	PPG1	P32838	368 aa		6.01	□□□□□ -1.45
CMR3	YPR013C	BDS1	Q08347	646 aa		6.01	□□□□□ -1.45
CMR3	YPR013C	WRS1	Q12109	432 aa	Known RBP	6.01	□□□□□ -1.45
CMR3	YPR013C	TBS1	P38114	1094 aa		6	□□□□□ -1.45
CMR3	YPR013C	RPS26A	P39938	119 aa	Known RBP	6	□□□□□ -1.45
CMR3	YPR013C	RPS26B	P39939	119 aa	Known RBP	6	□□□□□ -1.45
CMR3	YPR013C	RTT106	P40161	455 aa		6	□□□□□ -1.45
CMR3	YPR013C	YJL049W	P47048	450 aa		6	□□□□□ -1.45
CMR3	YPR013C	SAM37	P50110	327 aa		6	□□□□□ -1.45
CMR3	YPR013C	YNL011C	P53980	444 aa		6	□□□□□ -1.45
CMR3	YPR013C	ESF1	Q06344	628 aa	Known RBP	6	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 136.1 ms